summarylogtreecommitdiffstats
diff options
context:
space:
mode:
authorViktor Drobot2020-04-28 20:36:23 +0300
committerViktor Drobot2020-04-28 20:36:23 +0300
commit57137063047edd8daec8e8f6f66b221aaeaffb94 (patch)
tree9c6887634ffd0583f8ae09e0256f8459c63bb029
parente74467e7c8e5bdeebec34fdbbcb2d7183f500e15 (diff)
downloadaur-57137063047edd8daec8e8f6f66b221aaeaffb94.tar.gz
Update 2.55.7
-rw-r--r--.SRCINFO14
-rw-r--r--PKGBUILD8
2 files changed, 11 insertions, 11 deletions
diff --git a/.SRCINFO b/.SRCINFO
index e900e1044ec1..3ff5a580fcca 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,6 +1,6 @@
pkgbase = r-biostrings
pkgdesc = Efficient manipulation of biological strings
- pkgver = 2.54.0
+ pkgver = 2.55.7
pkgrel = 1
url = https://bioconductor.org/packages/release/bioc/html/Biostrings.html
arch = i686
@@ -9,10 +9,10 @@ pkgbase = r-biostrings
makedepends = gcc
depends = r>=3.5.0
depends = r-biocgenerics>=0.31.5
- depends = r-s4vectors>=0.21.13
- depends = r-iranges
- depends = r-xvector>=0.23.2
- optdepends = r-rmpi
+ depends = r-s4vectors>=0.25.14
+ depends = r-iranges>=2.21.6
+ depends = r-xvector>=0.27.2
+ depends = r-crayon
optdepends = r-bsgenome
optdepends = r-bsgenome.celegans.ucsc.ce2
optdepends = r-bsgenome.dmelanogaster.ucsc.dm3
@@ -25,8 +25,8 @@ pkgbase = r-biostrings
optdepends = r-affy
optdepends = r-affydata
optdepends = r-runit
- source = https://bioconductor.org/packages/release/bioc/src/contrib/Biostrings_2.54.0.tar.gz
- sha256sums = d7d799f0c8c9e5451171bd81e28ba3bb5b9838d3d5c8c62f954c74eaa078075f
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/Biostrings_2.55.7.tar.gz
+ sha256sums = 2d84ae4ba6f83f5b2133454c49dd21e231a1c57321b8deb4cd46b9fd75a7a61f
pkgname = r-biostrings
diff --git a/PKGBUILD b/PKGBUILD
index 5525a31696fb..cf06ff8da8af 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -2,7 +2,7 @@
# Contributor: Grey Christoforo <first name at last name dot net>
_bcname=Biostrings
-_bcver=2.54.0
+_bcver=2.55.7
pkgname=r-${_bcname,,}
pkgver=${_bcver//[:-]/.}
pkgrel=1
@@ -10,11 +10,11 @@ pkgdesc="Efficient manipulation of biological strings"
arch=(i686 x86_64)
url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html"
license=(Artistic-2.0)
-depends=('r>=3.5.0' 'r-biocgenerics>=0.31.5' 'r-s4vectors>=0.21.13' r-iranges 'r-xvector>=0.23.2')
+depends=('r>=3.5.0' 'r-biocgenerics>=0.31.5' 'r-s4vectors>=0.25.14' 'r-iranges>=2.21.6' 'r-xvector>=0.27.2' r-crayon)
makedepends=(gcc)
-optdepends=(r-rmpi r-bsgenome r-bsgenome.celegans.ucsc.ce2 r-bsgenome.dmelanogaster.ucsc.dm3 r-bsgenome.hsapiens.ucsc.hg18 r-drosophila2probe r-hgu95av2probe r-hgu133aprobe r-genomicfeatures r-hgu95av2cdf r-affy r-affydata r-runit)
+optdepends=(r-bsgenome r-bsgenome.celegans.ucsc.ce2 r-bsgenome.dmelanogaster.ucsc.dm3 r-bsgenome.hsapiens.ucsc.hg18 r-drosophila2probe r-hgu95av2probe r-hgu133aprobe r-genomicfeatures r-hgu95av2cdf r-affy r-affydata r-runit)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz")
-sha256sums=('d7d799f0c8c9e5451171bd81e28ba3bb5b9838d3d5c8c62f954c74eaa078075f')
+sha256sums=('2d84ae4ba6f83f5b2133454c49dd21e231a1c57321b8deb4cd46b9fd75a7a61f')
build() {
cd "${srcdir}"