add r-biotip

2 files changed, 62 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..a190da3aa0b9
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,23 @@
+pkgbase = r-biotip
+	pkgdesc = BioTIP: An R package for characterization of Biological Tipping-Point
+	pkgver = 1.10.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/BioTIP
+	arch = any
+	license = GPL
+	depends = r
+	depends = r-genomicranges
+	depends = r-hmisc
+	depends = r-igraph
+	depends = r-psych
+	depends = r-stringr
+	depends = r-scran
+	optdepends = r-base
+	optdepends = r-ggplot2
+	optdepends = r-knitr
+	optdepends = r-markdown
+	optdepends = r-rmarkdown
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/BioTIP_1.10.0.tar.gz
+	sha256sums = 06d2c9d607047fdf3794dd2e44b70ad8ad883e6e9b871e075c8ad6e37f8930ea
+
+pkgname = r-biotip
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..ee4cda8e1d2f
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,39 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=BioTIP
+_pkgver=1.10.0
+pkgname=r-${_pkgname,,}
+pkgver=1.10.0
+pkgrel=1
+pkgdesc='BioTIP: An R package for characterization of Biological Tipping-Point'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-genomicranges
+  r-hmisc
+  r-igraph
+  r-psych
+  r-stringr
+  r-scran
+)
+optdepends=(
+  r-base
+  r-ggplot2
+  r-knitr
+  r-markdown
+  r-rmarkdown
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('06d2c9d607047fdf3794dd2e44b70ad8ad883e6e9b871e075c8ad6e37f8930ea')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: