add r-bsgenome.hsapiens.ucsc.hg19

2 files changed, 40 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..b643a08a246f
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,13 @@
+pkgbase = r-bsgenome.hsapiens.ucsc.hg19
+	pkgdesc = Full genome sequences for Homo sapiens (UCSC version hg19, based on GRCh37.p13)
+	pkgver = 1.4.3
+	pkgrel = 4
+	url = https://bioconductor.org/packages/BSgenome.Hsapiens.UCSC.hg19
+	arch = any
+	license = Artistic2.0
+	depends = r
+	depends = r-bsgenome
+	source = https://bioconductor.org/packages/release/data/annotation/src/contrib/BSgenome.Hsapiens.UCSC.hg19_1.4.3.tar.gz
+	sha256sums = 5bfa65d7836449d9b30c356968497cdfaa98be48c4e329e71e8f8a120f3e9d1a
+
+pkgname = r-bsgenome.hsapiens.ucsc.hg19
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..774ef4e7dbe8
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,27 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=BSgenome.Hsapiens.UCSC.hg19
+_pkgver=1.4.3
+pkgname=r-${_pkgname,,}
+pkgver=1.4.3
+pkgrel=4
+pkgdesc='Full genome sequences for Homo sapiens (UCSC version hg19, based on GRCh37.p13)'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+  r
+  r-bsgenome
+)
+source=("https://bioconductor.org/packages/release/data/annotation/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('5bfa65d7836449d9b30c356968497cdfaa98be48c4e329e71e8f8a120f3e9d1a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: