add r-carnival

2 files changed, 60 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..547c59adf6a8
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,22 @@
+pkgbase = r-carnival
+	pkgdesc = A CAusal Reasoning tool for Network Identification (from gene expression data) using Integer VALue programming
+	pkgver = 2.6.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/CARNIVAL
+	arch = any
+	license = GPL
+	depends = r
+	depends = r-dplyr
+	depends = r-igraph
+	depends = r-lpsolve
+	depends = r-readr
+	depends = r-rjson
+	depends = r-rmarkdown
+	depends = r-stringr
+	depends = r-tidyr
+	optdepends = r-knitr
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/CARNIVAL_2.6.0.tar.gz
+	sha256sums = 19a33992d6e760651139e51846d00003767e2d35940be42314bba67d65141c2c
+
+pkgname = r-carnival
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..db508780e1ec
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,38 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=CARNIVAL
+_pkgver=2.6.0
+pkgname=r-${_pkgname,,}
+pkgver=2.6.0
+pkgrel=1
+pkgdesc='A CAusal Reasoning tool for Network Identification (from gene expression data) using Integer VALue programming'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-dplyr
+  r-igraph
+  r-lpsolve
+  r-readr
+  r-rjson
+  r-rmarkdown
+  r-stringr
+  r-tidyr
+)
+optdepends=(
+  r-knitr
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('19a33992d6e760651139e51846d00003767e2d35940be42314bba67d65141c2c')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: