add r-categorycompare

2 files changed, 83 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..501e2f853e17
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,33 @@
+pkgbase = r-categorycompare
+	pkgdesc = Meta-analysis of high-throughput experiments using feature annotations
+	pkgver = 1.40.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/categoryCompare
+	arch = any
+	license = GPL
+	depends = r
+	depends = r-annotate
+	depends = r-annotationdbi
+	depends = r-biobase
+	depends = r-biocgenerics
+	depends = r-category
+	depends = r-colorspace
+	depends = r-gostats
+	depends = r-graph
+	depends = r-gseabase
+	depends = r-hwriter
+	depends = r-rcy3
+	optdepends = r-affy
+	optdepends = r-estrogen
+	optdepends = r-genefilter
+	optdepends = r-go.db
+	optdepends = r-hgu95av2.db
+	optdepends = r-keggrest
+	optdepends = r-knitr
+	optdepends = r-limma
+	optdepends = r-org.hs.eg.db
+	optdepends = r-rmarkdown
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/categoryCompare_1.40.0.tar.gz
+	sha256sums = 4753b13f13a3ca48248d3cf9750813efc6ff3c5aabbd03b809cfc9794a7a2dae
+
+pkgname = r-categorycompare
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..fc121e322ba4
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,50 @@
+# system requirements: Cytoscape (>= 3.6.1) (if used for visualization ofresults, heavily suggested)
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=categoryCompare
+_pkgver=1.40.0
+pkgname=r-${_pkgname,,}
+pkgver=1.40.0
+pkgrel=1
+pkgdesc='Meta-analysis of high-throughput experiments using feature annotations'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-annotate
+  r-annotationdbi
+  r-biobase
+  r-biocgenerics
+  r-category
+  r-colorspace
+  r-gostats
+  r-graph
+  r-gseabase
+  r-hwriter
+  r-rcy3
+)
+optdepends=(
+  r-affy
+  r-estrogen
+  r-genefilter
+  r-go.db
+  r-hgu95av2.db
+  r-keggrest
+  r-knitr
+  r-limma
+  r-org.hs.eg.db
+  r-rmarkdown
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('4753b13f13a3ca48248d3cf9750813efc6ff3c5aabbd03b809cfc9794a7a2dae')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: