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| author | Sukanka | 2022-06-06 05:59:40 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 05:59:40 +0800 |
| commit | e90a2fd551bb077152fbc49a769b7e5dbe8e360e (patch) | |
| tree | 62dbb41e2293a89c4a58bbcd0787dc9a8f7cc1cc | |
| download | aur-e90a2fd551bb077152fbc49a769b7e5dbe8e360e.tar.gz | |
add r-cellnoptr
| -rw-r--r-- | .SRCINFO | 32 | ||||
| -rw-r--r-- | PKGBUILD | 49 |
2 files changed, 81 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..94f03fd80f95 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,32 @@ +pkgbase = r-cellnoptr + pkgdesc = Training of boolean logic models of signalling networks using prior knowledge networks and perturbation data + pkgver = 1.42.0 + pkgrel = 1 + url = https://bioconductor.org/packages/CellNOptR + arch = x86_64 + license = GPL + depends = r + depends = r-ggplot2 + depends = r-graph + depends = r-hash + depends = r-igraph + depends = r-rbgl + depends = r-rcurl + depends = r-rgraphviz + depends = r-stringi + depends = r-stringr + depends = r-xml + depends = graphviz + optdepends = r-biocgenerics + optdepends = r-data.table + optdepends = r-doparallel + optdepends = r-dplyr + optdepends = r-foreach + optdepends = r-plyr + optdepends = r-readr + optdepends = r-runit + optdepends = r-tidyr + source = https://bioconductor.org/packages/release/bioc/src/contrib/CellNOptR_1.42.0.tar.gz + sha256sums = 290c3393f30b00de013ba2041d25d11e3abdea0c43cfffbd82d709debcf9e00e + +pkgname = r-cellnoptr diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..e8c4b2c55feb --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,49 @@ +# system requirements: Graphviz version >= 2.2 +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=CellNOptR +_pkgver=1.42.0 +pkgname=r-${_pkgname,,} +pkgver=1.42.0 +pkgrel=1 +pkgdesc='Training of boolean logic models of signalling networks using prior knowledge networks and perturbation data' +arch=('x86_64') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-ggplot2 + r-graph + r-hash + r-igraph + r-rbgl + r-rcurl + r-rgraphviz + r-stringi + r-stringr + r-xml + graphviz +) +optdepends=( + r-biocgenerics + r-data.table + r-doparallel + r-dplyr + r-foreach + r-plyr + r-readr + r-runit + r-tidyr +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('290c3393f30b00de013ba2041d25d11e3abdea0c43cfffbd82d709debcf9e00e') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |