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| author | Sukanka | 2022-06-06 06:03:35 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 06:03:35 +0800 |
| commit | 0b556556cf0600fb2047c517f39067e51e3de357 (patch) | |
| tree | e402717be3d53aa7343243a686cad7e91d6aa7f2 | |
| download | aur-0b556556cf0600fb2047c517f39067e51e3de357.tar.gz | |
add r-cexor
| -rw-r--r-- | .SRCINFO | 26 | ||||
| -rw-r--r-- | PKGBUILD | 42 |
2 files changed, 68 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..56dad0b632bb --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,26 @@ +pkgbase = r-cexor + pkgdesc = An R package to uncover high-resolution protein-DNA interactions in ChIP-exo replicates + pkgver = 1.34.0 + pkgrel = 1 + url = https://bioconductor.org/packages/CexoR + arch = any + license = GPL + depends = r + depends = r-genomation + depends = r-genomeinfodb + depends = r-genomicranges + depends = r-idr + depends = r-iranges + depends = r-rcolorbrewer + depends = r-rsamtools + depends = r-rtracklayer + depends = r-s4vectors + optdepends = r-biocgenerics + optdepends = r-biocstyle + optdepends = r-knitr + optdepends = r-rmarkdown + optdepends = r-runit + source = https://bioconductor.org/packages/release/bioc/src/contrib/CexoR_1.34.0.tar.gz + sha256sums = 3c2bfdd3ced6bb7216b5ccca45266547aa10def6a74e93551197309e0d28f0ea + +pkgname = r-cexor diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..b64e6bac62cb --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,42 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=CexoR +_pkgver=1.34.0 +pkgname=r-${_pkgname,,} +pkgver=1.34.0 +pkgrel=1 +pkgdesc='An R package to uncover high-resolution protein-DNA interactions in ChIP-exo replicates' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-genomation + r-genomeinfodb + r-genomicranges + r-idr + r-iranges + r-rcolorbrewer + r-rsamtools + r-rtracklayer + r-s4vectors +) +optdepends=( + r-biocgenerics + r-biocstyle + r-knitr + r-rmarkdown + r-runit +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('3c2bfdd3ced6bb7216b5ccca45266547aa10def6a74e93551197309e0d28f0ea') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |