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| author | Sukanka | 2022-06-06 06:04:22 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 06:04:22 +0800 |
| commit | 3972405549bb956331e1facfbaf5c836ec1e0c23 (patch) | |
| tree | c6f123b769f136533f14917b77d742e9ecdaee07 | |
| download | aur-3972405549bb956331e1facfbaf5c836ec1e0c23.tar.gz | |
add r-cfdnapro
| -rw-r--r-- | .SRCINFO | 26 | ||||
| -rw-r--r-- | PKGBUILD | 42 |
2 files changed, 68 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..da3d8c300ec0 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,26 @@ +pkgbase = r-cfdnapro + pkgdesc = cfDNAPro Helps Characterise and Visualise Whole Genome Sequencing Data from Liquid Biopsy + pkgver = 1.2.0 + pkgrel = 1 + url = https://bioconductor.org/packages/cfDNAPro + arch = any + license = GPL + depends = r + depends = r-dplyr + depends = r-ggplot2 + depends = r-magrittr + depends = r-quantmod + depends = r-rlang + depends = r-rsamtools + depends = r-stringr + optdepends = r-biocstyle + optdepends = r-devtools + optdepends = r-ggpubr + optdepends = r-knitr + optdepends = r-rmarkdown + optdepends = r-scales + optdepends = r-testthat + source = https://bioconductor.org/packages/release/bioc/src/contrib/cfDNAPro_1.2.0.tar.gz + sha256sums = 803187b841cd8fc307c03ea63258484359a1c901dc63e8e29251504bc4b875ad + +pkgname = r-cfdnapro diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..fcd55dc502a5 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,42 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=cfDNAPro +_pkgver=1.2.0 +pkgname=r-${_pkgname,,} +pkgver=1.2.0 +pkgrel=1 +pkgdesc='cfDNAPro Helps Characterise and Visualise Whole Genome Sequencing Data from Liquid Biopsy' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-dplyr + r-ggplot2 + r-magrittr + r-quantmod + r-rlang + r-rsamtools + r-stringr +) +optdepends=( + r-biocstyle + r-devtools + r-ggpubr + r-knitr + r-rmarkdown + r-scales + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('803187b841cd8fc307c03ea63258484359a1c901dc63e8e29251504bc4b875ad') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |