add r-chipenrich

2 files changed, 86 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..90178ada37a8
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,35 @@
+pkgbase = r-chipenrich
+	pkgdesc = Gene Set Enrichment For ChIP-seq Peak Data
+	pkgver = 2.20.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/chipenrich
+	arch = any
+	license = GPL
+	depends = r
+	depends = r-annotationdbi
+	depends = r-biocgenerics
+	depends = r-chipenrich.data
+	depends = r-genomeinfodb
+	depends = r-genomicranges
+	depends = r-iranges
+	depends = r-latticeextra
+	depends = r-org.dm.eg.db
+	depends = r-org.dr.eg.db
+	depends = r-org.hs.eg.db
+	depends = r-org.mm.eg.db
+	depends = r-org.rn.eg.db
+	depends = r-plyr
+	depends = r-rms
+	depends = r-rtracklayer
+	depends = r-s4vectors
+	depends = r-stringr
+	optdepends = r-biocstyle
+	optdepends = r-devtools
+	optdepends = r-knitr
+	optdepends = r-rmarkdown
+	optdepends = r-roxygen2
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/chipenrich_2.20.0.tar.gz
+	sha256sums = 2f0c3cc9c85b34b6923a9619a937fdbcee23206f330c108434c13e3fe183dd59
+
+pkgname = r-chipenrich
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..c79d0a9126fa
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,51 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=chipenrich
+_pkgver=2.20.0
+pkgname=r-${_pkgname,,}
+pkgver=2.20.0
+pkgrel=1
+pkgdesc='Gene Set Enrichment For ChIP-seq Peak Data'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-annotationdbi
+  r-biocgenerics
+  r-chipenrich.data
+  r-genomeinfodb
+  r-genomicranges
+  r-iranges
+  r-latticeextra
+  r-org.dm.eg.db
+  r-org.dr.eg.db
+  r-org.hs.eg.db
+  r-org.mm.eg.db
+  r-org.rn.eg.db
+  r-plyr
+  r-rms
+  r-rtracklayer
+  r-s4vectors
+  r-stringr
+)
+optdepends=(
+  r-biocstyle
+  r-devtools
+  r-knitr
+  r-rmarkdown
+  r-roxygen2
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('2f0c3cc9c85b34b6923a9619a937fdbcee23206f330c108434c13e3fe183dd59')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: