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authorBioArchLinuxBot2024-02-12 12:02:29 +0000
committerBioArchLinuxBot2024-02-12 12:02:29 +0000
commit00dc0b0424c2feba338e84bb1231a4e3a1b9b8b7 (patch)
treec07b32f2bce61f83cac993304ad8f3903bb53ff7
parenta9c2760910c8e4bd0c19164f9c6cdd29afb17621 (diff)
downloadaur-00dc0b0424c2feba338e84bb1231a4e3a1b9b8b7.tar.gz
[lilac] updated to 1.8.0-2
-rw-r--r--.SRCINFO10
-rw-r--r--PKGBUILD26
2 files changed, 18 insertions, 18 deletions
diff --git a/.SRCINFO b/.SRCINFO
index f2d742354831..0e898699d047 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,11 +1,10 @@
pkgbase = r-cnvgears
pkgdesc = A Framework of Functions to Combine, Analize and Interpret CNVs Calling Results
pkgver = 1.8.0
- pkgrel = 1
+ pkgrel = 2
url = https://bioconductor.org/packages/CNVgears
arch = any
- license = GPL
- depends = r
+ license = GPL-3.0-only
depends = r-data.table
depends = r-ggplot2
optdepends = r-biomart
@@ -22,7 +21,8 @@ pkgbase = r-cnvgears
optdepends = r-testthat
optdepends = r-usethis
optdepends = r-variantannotation
- source = https://bioconductor.org/packages/release/bioc/src/contrib/CNVgears_1.8.0.tar.gz
- sha256sums = 7d6be48cbd95fe83af70059b2c3797b97ac81d34a8c816f59d9f0d65e7efeddc
+ source = https://bioconductor.org/packages/3.17/bioc/src/contrib/CNVgears_1.8.0.tar.gz
+ md5sums = b1a4be3f56d83bfa3e3c7c67208641b2
+ b2sums = 3259fac597d894d6bffe75a997e9c0d8052fd30643f6b947ecfb62bf754a6979a3ea3196ad4324b0b79f56dffea09d879bc600df7cde46b9b43f899a14e3abba
pkgname = r-cnvgears
diff --git a/PKGBUILD b/PKGBUILD
index 459abf69ea58..d947037d5b92 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -3,14 +3,13 @@
_pkgname=CNVgears
_pkgver=1.8.0
pkgname=r-${_pkgname,,}
-pkgver=1.8.0
-pkgrel=1
-pkgdesc='A Framework of Functions to Combine, Analize and Interpret CNVs Calling Results'
-arch=('any')
-url="https://bioconductor.org/packages/${_pkgname}"
-license=('GPL')
+pkgver=${_pkgver//-/.}
+pkgrel=2
+pkgdesc="A Framework of Functions to Combine, Analize and Interpret CNVs Calling Results"
+arch=(any)
+url="https://bioconductor.org/packages/$_pkgname"
+license=('GPL-3.0-only')
depends=(
- r
r-data.table
r-ggplot2
)
@@ -30,15 +29,16 @@ optdepends=(
r-usethis
r-variantannotation
)
-source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('7d6be48cbd95fe83af70059b2c3797b97ac81d34a8c816f59d9f0d65e7efeddc')
+source=("https://bioconductor.org/packages/3.17/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+md5sums=('b1a4be3f56d83bfa3e3c7c67208641b2')
+b2sums=('3259fac597d894d6bffe75a997e9c0d8052fd30643f6b947ecfb62bf754a6979a3ea3196ad4324b0b79f56dffea09d879bc600df7cde46b9b43f899a14e3abba')
build() {
- R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+ mkdir build
+ R CMD INSTALL -l build "$_pkgname"
}
package() {
- install -dm0755 "${pkgdir}/usr/lib/R/library"
- cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+ install -d "$pkgdir/usr/lib/R/library"
+ cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
-# vim:set ts=2 sw=2 et: