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| author | Sukanka | 2022-06-06 06:44:21 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 06:44:21 +0800 |
| commit | ac6b18389d2f704c40e945c8a8e45fecbd6e5dc6 (patch) | |
| tree | b37fe426bba864658a87457632f4e96f8f2b5f46 | |
| download | aur-ac6b18389d2f704c40e945c8a8e45fecbd6e5dc6.tar.gz | |
add r-cnvgears
| -rw-r--r-- | .SRCINFO | 28 | ||||
| -rw-r--r-- | PKGBUILD | 44 |
2 files changed, 72 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..3804bc0bd592 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,28 @@ +pkgbase = r-cnvgears + pkgdesc = A Framework of Functions to Combine, Analize and Interpret CNVs Calling Results + pkgver = 1.4.0 + pkgrel = 1 + url = https://bioconductor.org/packages/CNVgears + arch = any + license = GPL + depends = r + depends = r-data.table + depends = r-ggplot2 + optdepends = r-biomart + optdepends = r-cn.mops + optdepends = r-cowplot + optdepends = r-delayedarray + optdepends = r-devtools + optdepends = r-evobir + optdepends = r-genomicranges + optdepends = r-knitr + optdepends = r-r.utils + optdepends = r-rmarkdown + optdepends = r-scales + optdepends = r-testthat + optdepends = r-usethis + optdepends = r-variantannotation + source = https://bioconductor.org/packages/release/bioc/src/contrib/CNVgears_1.4.0.tar.gz + sha256sums = ca3bd38f874ca4dccdd89243e44085159a533e08ebad9505183299a5fbda23d9 + +pkgname = r-cnvgears diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..cbd59b7a6179 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,44 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=CNVgears +_pkgver=1.4.0 +pkgname=r-${_pkgname,,} +pkgver=1.4.0 +pkgrel=1 +pkgdesc='A Framework of Functions to Combine, Analize and Interpret CNVs Calling Results' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-data.table + r-ggplot2 +) +optdepends=( + r-biomart + r-cn.mops + r-cowplot + r-delayedarray + r-devtools + r-evobir + r-genomicranges + r-knitr + r-r.utils + r-rmarkdown + r-scales + r-testthat + r-usethis + r-variantannotation +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('ca3bd38f874ca4dccdd89243e44085159a533e08ebad9505183299a5fbda23d9') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |