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authorBioArchLinuxBot2022-11-26 14:55:50 +0000
committerBioArchLinuxBot2022-11-26 14:55:50 +0000
commit7f6e37f44525ba8a9a4bb512a750992c229a1f2d (patch)
treecd7df4c7b77aaf9d799a843dc97f17436ed06274
parent3b5a8249a4fc90ddc47803e54d9ae7c293bc604d (diff)
downloadaur-7f6e37f44525ba8a9a4bb512a750992c229a1f2d.tar.gz
[lilac] updated to 1.34.0-3
-rw-r--r--.SRCINFO8
-rw-r--r--PKGBUILD8
2 files changed, 14 insertions, 2 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 2c94fcc7f46b..bd8c10e9f459 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,7 +1,7 @@
pkgbase = r-compcoder
pkgdesc = RNAseq data simulation, differential expression analysis and performance comparison of differential expression methods
pkgver = 1.34.0
- pkgrel = 1
+ pkgrel = 3
url = https://bioconductor.org/packages/compcodeR
arch = any
license = GPL
@@ -25,16 +25,22 @@ pkgbase = r-compcoder
depends = r-phylolm
optdepends = r-bayseq
optdepends = r-biocstyle
+ optdepends = r-covr
optdepends = r-deseq2
optdepends = r-dss
optdepends = r-ebseq
optdepends = r-genefilter
+ optdepends = r-ggtree
optdepends = r-nbpseq
optdepends = r-noiseq
+ optdepends = r-phangorn
+ optdepends = r-phytools
optdepends = r-rmarkdown
optdepends = r-rpanel
+ optdepends = r-statmod
optdepends = r-tcc
optdepends = r-testthat
+ optdepends = r-tidytree
source = https://bioconductor.org/packages/release/bioc/src/contrib/compcodeR_1.34.0.tar.gz
sha256sums = f9575fddbd5a17750695c1df4f0bb394792a7755a52da5f334a0b967e2db5bb1
diff --git a/PKGBUILD b/PKGBUILD
index 5b31d107b350..4bcf59504067 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -4,7 +4,7 @@ _pkgname=compcodeR
_pkgver=1.34.0
pkgname=r-${_pkgname,,}
pkgver=1.34.0
-pkgrel=1
+pkgrel=3
pkgdesc='RNAseq data simulation, differential expression analysis and performance comparison of differential expression methods'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
@@ -32,16 +32,22 @@ depends=(
optdepends=(
r-bayseq
r-biocstyle
+ r-covr
r-deseq2
r-dss
r-ebseq
r-genefilter
+ r-ggtree
r-nbpseq
r-noiseq
+ r-phangorn
+ r-phytools
r-rmarkdown
r-rpanel
+ r-statmod
r-tcc
r-testthat
+ r-tidytree
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('f9575fddbd5a17750695c1df4f0bb394792a7755a52da5f334a0b967e2db5bb1')