Version 1.0.0

2 files changed, 97 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..6fc118cf6793
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,39 @@
+pkgbase = r-cosia
+	pkgdesc = An Investigation Across Different Species and Tissues
+	pkgver = 1.0.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/CoSIA
+	arch = any
+	license = MIT
+	depends = r-annotationdbi
+	depends = r-annotationtools
+	depends = r-biomart
+	depends = r-dplyr
+	depends = r-experimenthub
+	depends = r-ggplot2
+	depends = r-homologene
+	depends = r-magrittr
+	depends = r-org.ce.eg.db
+	depends = r-org.dm.eg.db
+	depends = r-org.dr.eg.db
+	depends = r-org.hs.eg.db
+	depends = r-org.mm.eg.db
+	depends = r-org.rn.eg.db
+	depends = r-plotly
+	depends = r-rcolorbrewer
+	depends = r-readr
+	depends = r-stringr
+	depends = r-tibble
+	depends = r-tidyr
+	depends = r-tidyselect
+	optdepends = r-biocstyle
+	optdepends = r-knitr
+	optdepends = r-qpdf
+	optdepends = r-rmarkdown
+	optdepends = r-testthat
+	optdepends = r-tidyverse
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/CoSIA_1.0.0.tar.gz
+	md5sums = 3f8ef5bd89e113c1bf68ce002bd54140
+	sha256sums = 303452b7fa963d3a46e9344beb02dcf7ddb3650d3e45f547580e50496ac102c3
+
+pkgname = r-cosia
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..7f4b6d5731d1
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,58 @@
+# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
+
+_pkgname=CoSIA
+_pkgver=1.0.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//-/.}
+pkgrel=1
+pkgdesc="An Investigation Across Different Species and Tissues"
+arch=(any)
+url="https://bioconductor.org/packages/${_pkgname}"
+license=(MIT)
+depends=(
+  r-annotationdbi
+  r-annotationtools
+  r-biomart
+  r-dplyr
+  r-experimenthub
+  r-ggplot2
+  r-homologene
+  r-magrittr
+  r-org.ce.eg.db
+  r-org.dm.eg.db
+  r-org.dr.eg.db
+  r-org.hs.eg.db
+  r-org.mm.eg.db
+  r-org.rn.eg.db
+  r-plotly
+  r-rcolorbrewer
+  r-readr
+  r-stringr
+  r-tibble
+  r-tidyr
+  r-tidyselect
+)
+optdepends=(
+  r-biocstyle
+  r-knitr
+  r-qpdf
+  r-rmarkdown
+  r-testthat
+  r-tidyverse
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+md5sums=('3f8ef5bd89e113c1bf68ce002bd54140')
+sha256sums=('303452b7fa963d3a46e9344beb02dcf7ddb3650d3e45f547580e50496ac102c3')
+
+build() {
+  mkdir -p build
+  R CMD INSTALL "$_pkgname" -l build
+}
+
+package() {
+  install -d "$pkgdir/usr/lib/R/library"
+  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
+
+  install -d "$pkgdir/usr/share/licenses/$pkgname"
+  ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
+}