summarylogtreecommitdiffstats
diff options
context:
space:
mode:
authorBioArchLinuxBot2022-11-26 16:19:44 +0000
committerBioArchLinuxBot2022-11-26 16:19:44 +0000
commitcf28fef7364d5643b2e8bb337004fead041a33fe (patch)
tree9cafc7bc56e95de5b900455f459b7c07e2b38ae9
parentbaf24c51229cbb1ea44f5597df61e7cc53c18c80 (diff)
downloadaur-cf28fef7364d5643b2e8bb337004fead041a33fe.tar.gz
[lilac] updated to 1.24.0-3
-rw-r--r--.SRCINFO13
-rw-r--r--PKGBUILD13
2 files changed, 8 insertions, 18 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 25ecb106c2a6..3124e7f9685e 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,10 +1,13 @@
pkgbase = r-crossmeta
pkgdesc = Cross Platform Meta-Analysis of Microarray Data
pkgver = 1.24.0
- pkgrel = 1
+ pkgrel = 3
url = https://bioconductor.org/packages/crossmeta
arch = any
license = MIT
+ depends = curl
+ depends = libxml2
+ depends = openssh
depends = r
depends = r-affxparser
depends = r-affy
@@ -14,7 +17,6 @@ pkgbase = r-crossmeta
depends = r-biocmanager
depends = r-data.table
depends = r-dbi
- depends = r-deseq2
depends = r-dt
depends = r-edger
depends = r-fdrtool
@@ -24,7 +26,6 @@ pkgbase = r-crossmeta
depends = r-metama
depends = r-miniui
depends = r-oligo
- depends = r-rcolorbrewer
depends = r-rcurl
depends = r-reader
depends = r-readxl
@@ -34,21 +35,15 @@ pkgbase = r-crossmeta
depends = r-shinyjs
depends = r-shinypanel
depends = r-shinywidgets
- depends = r-statmod
depends = r-stringr
- depends = r-summarizedexperiment
depends = r-sva
depends = r-tibble
depends = r-xml
- depends = libxml2
- depends = openssh
- depends = curl
optdepends = r-knitr
optdepends = r-lydata
optdepends = r-org.hs.eg.db
optdepends = r-rmarkdown
optdepends = r-testthat
- optdepends = r-tximportdata
source = https://bioconductor.org/packages/release/bioc/src/contrib/crossmeta_1.24.0.tar.gz
sha256sums = c80aaa69451750c5b67442f39c0a5ec543f75ef60c8553d369c15a992421142d
diff --git a/PKGBUILD b/PKGBUILD
index 1f9a2015dc10..373536a3f913 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -5,12 +5,15 @@ _pkgname=crossmeta
_pkgver=1.24.0
pkgname=r-${_pkgname,,}
pkgver=1.24.0
-pkgrel=1
+pkgrel=3
pkgdesc='Cross Platform Meta-Analysis of Microarray Data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
+ curl
+ libxml2
+ openssh
r
r-affxparser
r-affy
@@ -20,7 +23,6 @@ depends=(
r-biocmanager
r-data.table
r-dbi
- r-deseq2
r-dt
r-edger
r-fdrtool
@@ -30,7 +32,6 @@ depends=(
r-metama
r-miniui
r-oligo
- r-rcolorbrewer
r-rcurl
r-reader
r-readxl
@@ -40,15 +41,10 @@ depends=(
r-shinyjs
r-shinypanel
r-shinywidgets
- r-statmod
r-stringr
- r-summarizedexperiment
r-sva
r-tibble
r-xml
- libxml2
- openssh
- curl
)
optdepends=(
r-knitr
@@ -56,7 +52,6 @@ optdepends=(
r-org.hs.eg.db
r-rmarkdown
r-testthat
- r-tximportdata
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('c80aaa69451750c5b67442f39c0a5ec543f75ef60c8553d369c15a992421142d')