add r-ctsge

2 files changed, 68 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..1ac78d715b3f
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,26 @@
+pkgbase = r-ctsge
+	pkgdesc = Clustering of Time Series Gene Expression data
+	pkgver = 1.22.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/ctsGE
+	arch = any
+	license = GPL
+	depends = r
+	depends = r-ccapp
+	depends = r-ggplot2
+	depends = r-limma
+	depends = r-reshape2
+	depends = r-shiny
+	depends = r-stringr
+	optdepends = r-biocstyle
+	optdepends = r-dplyr
+	optdepends = r-dt
+	optdepends = r-geoquery
+	optdepends = r-knitr
+	optdepends = r-pander
+	optdepends = r-rmarkdown
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/ctsGE_1.22.0.tar.gz
+	sha256sums = c8db630c93c3d756a772831e8518dd6e40c939408f32dd93d5c17476d2589869
+
+pkgname = r-ctsge
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..13eefe43ffd3
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,42 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=ctsGE
+_pkgver=1.22.0
+pkgname=r-${_pkgname,,}
+pkgver=1.22.0
+pkgrel=1
+pkgdesc='Clustering of Time Series Gene Expression data'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-ccapp
+  r-ggplot2
+  r-limma
+  r-reshape2
+  r-shiny
+  r-stringr
+)
+optdepends=(
+  r-biocstyle
+  r-dplyr
+  r-dt
+  r-geoquery
+  r-knitr
+  r-pander
+  r-rmarkdown
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('c8db630c93c3d756a772831e8518dd6e40c939408f32dd93d5c17476d2589869')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: