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| author | Sukanka | 2022-06-06 07:33:25 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 07:33:25 +0800 |
| commit | 36113dc814ca32d678af23740c7a4cb6216f326a (patch) | |
| tree | a5945495440f4e7fa5226c729e61236b1c68a563 | |
| download | aur-36113dc814ca32d678af23740c7a4cb6216f326a.tar.gz | |
add r-cytomapper
| -rw-r--r-- | .SRCINFO | 38 | ||||
| -rw-r--r-- | PKGBUILD | 54 |
2 files changed, 92 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..c8a8f81499ee --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,38 @@ +pkgbase = r-cytomapper + pkgdesc = Visualization of highly multiplexed imaging data in R + pkgver = 1.8.0 + pkgrel = 1 + url = https://bioconductor.org/packages/cytomapper + arch = any + license = GPL + depends = r + depends = r-biocparallel + depends = r-delayedarray + depends = r-ebimage + depends = r-ggbeeswarm + depends = r-ggplot2 + depends = r-hdf5array + depends = r-matrixstats + depends = r-raster + depends = r-rcolorbrewer + depends = r-rhdf5 + depends = r-s4vectors + depends = r-shiny + depends = r-shinydashboard + depends = r-singlecellexperiment + depends = r-summarizedexperiment + depends = r-svglite + depends = r-svgpanzoom + depends = r-viridis + depends = r-nnls + optdepends = r-biocstyle + optdepends = r-cowplot + optdepends = r-knitr + optdepends = r-markdown + optdepends = r-rmarkdown + optdepends = r-shinytest + optdepends = r-testthat + source = https://bioconductor.org/packages/release/bioc/src/contrib/cytomapper_1.8.0.tar.gz + sha256sums = 99dbd17842ac9dd1a7a386022c627b2d491c8f6ed8641b22bcf52860810879eb + +pkgname = r-cytomapper diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..a04f9c5f4bf0 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,54 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=cytomapper +_pkgver=1.8.0 +pkgname=r-${_pkgname,,} +pkgver=1.8.0 +pkgrel=1 +pkgdesc='Visualization of highly multiplexed imaging data in R' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-biocparallel + r-delayedarray + r-ebimage + r-ggbeeswarm + r-ggplot2 + r-hdf5array + r-matrixstats + r-raster + r-rcolorbrewer + r-rhdf5 + r-s4vectors + r-shiny + r-shinydashboard + r-singlecellexperiment + r-summarizedexperiment + r-svglite + r-svgpanzoom + r-viridis + r-nnls +) +optdepends=( + r-biocstyle + r-cowplot + r-knitr + r-markdown + r-rmarkdown + r-shinytest + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('99dbd17842ac9dd1a7a386022c627b2d491c8f6ed8641b22bcf52860810879eb') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |