diff options
| author | Grey Christoforo | 2019-02-09 15:10:29 +0000 |
|---|---|---|
| committer | Grey Christoforo | 2019-02-09 15:10:29 +0000 |
| commit | ca1083022def029d9c22e012123a0d5ceefc944c (patch) | |
| tree | 2bfe5eb9f1aa33cc5364d2fdb368ae3b255fb0a4 | |
| download | aur-ca1083022def029d9c22e012123a0d5ceefc944c.tar.gz | |
initial commit
| -rw-r--r-- | .SRCINFO | 23 | ||||
| -rw-r--r-- | .gitignore | 4 | ||||
| -rw-r--r-- | PKGBUILD | 19 |
3 files changed, 46 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..cb328e3346f5 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,23 @@ +pkgbase = r-dada2 + pkgdesc = Accurate, high-resolution sample inference from amplicon sequencing data + pkgver = 1.10.1 + pkgrel = 1 + url = https://bioconductor.org/packages/release/bioc/html/dada2.html + arch = x86_64 + license = Artistic-2.0 + depends = r + depends = r-rcpp + depends = r-biostrings + depends = r-ggplot2 + depends = r-datatable + depends = r-reshape2 + depends = r-shortread + depends = r-rcppparallel + depends = r-iranges + depends = r-xvector + depends = r-biocgenerics + source = https://bioconductor.org/packages/release/bioc/src/contrib/dada2_1.10.1.tar.gz + sha1sums = a521e44bf3b08516ef789473b4081e58edb713bc + +pkgname = r-dada2 + diff --git a/.gitignore b/.gitignore new file mode 100644 index 000000000000..6ae0b18a1f6c --- /dev/null +++ b/.gitignore @@ -0,0 +1,4 @@ +/pkg +/src +*.tar.gz +*.tar.xz diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..b23bf3360b4d --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,19 @@ +# Contributor: Grey Christoforo <first name at last name dot net> +pkgname=r-dada2 +_bc_name=dada2 +pkgver=1.10.1 +pkgrel=1 +pkgdesc="Accurate, high-resolution sample inference from amplicon sequencing data" +url="https://bioconductor.org/packages/release/bioc/html/${_bc_name}.html" +arch=("x86_64") +license=('Artistic-2.0') +depends=('r' 'r-rcpp' 'r-biostrings' 'r-ggplot2' 'r-datatable' 'r-reshape2' 'r-shortread' 'r-rcppparallel' 'r-iranges' 'r-xvector' 'r-biocgenerics') +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bc_name}_${pkgver}.tar.gz") +sha1sums=('a521e44bf3b08516ef789473b4081e58edb713bc') + +package() { + mkdir -p $pkgdir/usr/lib/R/library + cd $srcdir + + R CMD INSTALL -l $pkgdir/usr/lib/R/library ./${_bc_name} +} |