add r-debrowser

2 files changed, 116 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..36059443958e
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,50 @@
+pkgbase = r-debrowser
+	pkgdesc = Interactive Differential Expresion Analysis Browser
+	pkgver = 1.24.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/debrowser
+	arch = any
+	license = GPL
+	depends = r
+	depends = r-annotate
+	depends = r-annotationdbi
+	depends = r-apeglm
+	depends = r-ashr
+	depends = r-clusterprofiler
+	depends = r-colourpicker
+	depends = r-deseq2
+	depends = r-dose
+	depends = r-dt
+	depends = r-edger
+	depends = r-enrichplot
+	depends = r-genomicranges
+	depends = r-ggplot2
+	depends = r-gplots
+	depends = r-harman
+	depends = r-heatmaply
+	depends = r-igraph
+	depends = r-iranges
+	depends = r-jsonlite
+	depends = r-limma
+	depends = r-org.hs.eg.db
+	depends = r-org.mm.eg.db
+	depends = r-pathview
+	depends = r-plotly
+	depends = r-rcolorbrewer
+	depends = r-rcurl
+	depends = r-reshape2
+	depends = r-s4vectors
+	depends = r-shiny
+	depends = r-shinybs
+	depends = r-shinydashboard
+	depends = r-shinyjs
+	depends = r-stringi
+	depends = r-summarizedexperiment
+	depends = r-sva
+	optdepends = r-knitr
+	optdepends = r-rmarkdown
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/debrowser_1.24.0.tar.gz
+	sha256sums = 0e2111e2a726b5d93fb4d0f624e83b6aca39be0a083f2eb6268f603c312a6b0c
+
+pkgname = r-debrowser
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..461996179d32
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,66 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=debrowser
+_pkgver=1.24.0
+pkgname=r-${_pkgname,,}
+pkgver=1.24.0
+pkgrel=1
+pkgdesc='Interactive Differential Expresion Analysis Browser'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-annotate
+  r-annotationdbi
+  r-apeglm
+  r-ashr
+  r-clusterprofiler
+  r-colourpicker
+  r-deseq2
+  r-dose
+  r-dt
+  r-edger
+  r-enrichplot
+  r-genomicranges
+  r-ggplot2
+  r-gplots
+  r-harman
+  r-heatmaply
+  r-igraph
+  r-iranges
+  r-jsonlite
+  r-limma
+  r-org.hs.eg.db
+  r-org.mm.eg.db
+  r-pathview
+  r-plotly
+  r-rcolorbrewer
+  r-rcurl
+  r-reshape2
+  r-s4vectors
+  r-shiny
+  r-shinybs
+  r-shinydashboard
+  r-shinyjs
+  r-stringi
+  r-summarizedexperiment
+  r-sva
+)
+optdepends=(
+  r-knitr
+  r-rmarkdown
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('0e2111e2a726b5d93fb4d0f624e83b6aca39be0a083f2eb6268f603c312a6b0c')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: