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author | Sukanka | 2022-06-06 07:46:16 +0800 |
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committer | Sukanka | 2022-06-06 07:46:16 +0800 |
commit | eccaa219481cda862c90717a52b003e77b71658c (patch) | |
tree | 00c3394df9a60e28c7976196c4cbf869d2d10ea2 | |
download | aur-eccaa219481cda862c90717a52b003e77b71658c.tar.gz |
add r-deconstructsigs
-rw-r--r-- | .SRCINFO | 17 | ||||
-rw-r--r-- | PKGBUILD | 33 |
2 files changed, 50 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..8be863d7b6b4 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,17 @@ +pkgbase = r-deconstructsigs + pkgdesc = Identifies Signatures Present in a Tumor Sample + pkgver = 1.8.0 + pkgrel = 3 + url = https://cran.r-project.org/package=deconstructSigs + arch = any + license = GPL + depends = r + depends = r-bsgenome + depends = r-bsgenome.hsapiens.ucsc.hg19 + depends = r-genomeinfodb + depends = r-reshape2 + optdepends = r-variantannotation + source = https://cran.r-project.org/src/contrib/deconstructSigs_1.8.0.tar.gz + sha256sums = 2ab8f6c0fd674bd270035ba2112f1a79d63de1155ba9698c4169c92196059d04 + +pkgname = r-deconstructsigs diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..9fbdafde5ea3 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,33 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=deconstructSigs +_pkgver=1.8.0 +pkgname=r-${_pkgname,,} +pkgver=1.8.0 +pkgrel=3 +pkgdesc='Identifies Signatures Present in a Tumor Sample' +arch=('any') +url="https://cran.r-project.org/package=${_pkgname}" +license=('GPL') +depends=( + r + r-bsgenome + r-bsgenome.hsapiens.ucsc.hg19 + r-genomeinfodb + r-reshape2 +) +optdepends=( + r-variantannotation +) +source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('2ab8f6c0fd674bd270035ba2112f1a79d63de1155ba9698c4169c92196059d04') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |