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authorBioArchLinuxBot2024-02-08 13:17:23 +0000
committerBioArchLinuxBot2024-02-08 13:17:23 +0000
commit2d53dbd046af2e30f6fb54e11833df9a3e65bb4c (patch)
tree1c924ee5ea2c2a07460d6b46a0e72150cf44f46f
parenteac638d02903c119340756308b78bc2c1547ca6b (diff)
downloadaur-2d53dbd046af2e30f6fb54e11833df9a3e65bb4c.tar.gz
[lilac] updated to 1.0.0-3
-rw-r--r--.SRCINFO5
-rw-r--r--PKGBUILD13
2 files changed, 10 insertions, 8 deletions
diff --git a/.SRCINFO b/.SRCINFO
index a41740c7d6ad..3cf8a1fc16db 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,7 +1,7 @@
pkgbase = r-decontx
pkgdesc = Decontamination of single cell genomics data
pkgver = 1.0.0
- pkgrel = 1
+ pkgrel = 3
url = https://bioconductor.org/packages/decontX
arch = x86_64
license = MIT
@@ -9,6 +9,7 @@ pkgbase = r-decontx
makedepends = r-bh
makedepends = r-rcppeigen
makedepends = r-stanheaders
+ depends = onetbb
depends = r-celda
depends = r-dbscan
depends = r-delayedarray
@@ -37,6 +38,6 @@ pkgbase = r-decontx
optdepends = r-testthat
source = https://bioconductor.org/packages/release/bioc/src/contrib/decontX_1.0.0.tar.gz
md5sums = 1e2f4af9204397b8104543dd954bb390
- sha256sums = 688151c203ef4607d02c2fd27e1dccae5204128cbc98c1ba9ef087082d9fe598
+ b2sums = f6083f5678fbaeb0676893f1a70d33946392b67d88902cb59202d083f5dd137d43e09f7dec92f8df3353c968283e018791a7c4075e2cf7f12c497425824fc152
pkgname = r-decontx
diff --git a/PKGBUILD b/PKGBUILD
index 0861a9ebc047..16e6bb4933e4 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -4,12 +4,13 @@ _pkgname=decontX
_pkgver=1.0.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
-pkgrel=1
+pkgrel=3
pkgdesc="Decontamination of single cell genomics data"
arch=(x86_64)
-url="https://bioconductor.org/packages/${_pkgname}"
-license=(MIT)
+url="https://bioconductor.org/packages/$_pkgname"
+license=('MIT')
depends=(
+ onetbb
r-celda
r-dbscan
r-delayedarray
@@ -49,11 +50,11 @@ optdepends=(
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('1e2f4af9204397b8104543dd954bb390')
-sha256sums=('688151c203ef4607d02c2fd27e1dccae5204128cbc98c1ba9ef087082d9fe598')
+b2sums=('f6083f5678fbaeb0676893f1a70d33946392b67d88902cb59202d083f5dd137d43e09f7dec92f8df3353c968283e018791a7c4075e2cf7f12c497425824fc152')
build() {
- mkdir -p build
- R CMD INSTALL "$_pkgname" -l build
+ mkdir build
+ R CMD INSTALL -l build "$_pkgname"
}
check() {