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author | Sukanka | 2022-06-06 07:47:02 +0800 |
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committer | Sukanka | 2022-06-06 07:47:02 +0800 |
commit | 9856fd90eefd2dfb87b8eb1da4ab227334142b38 (patch) | |
tree | 11d8f62a7166bf135c8161fb1a3b35c940e6716d | |
download | aur-9856fd90eefd2dfb87b8eb1da4ab227334142b38.tar.gz |
add r-deconvr
-rw-r--r-- | .SRCINFO | 42 | ||||
-rw-r--r-- | PKGBUILD | 58 |
2 files changed, 100 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..d7b8b683c542 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,42 @@ +pkgbase = r-deconvr + pkgdesc = Simulation and Deconvolution of Omic Profiles + pkgver = 1.2.0 + pkgrel = 1 + url = https://bioconductor.org/packages/deconvR + arch = any + license = Artistic2.0 + depends = r + depends = r-assertthat + depends = r-biocgenerics + depends = r-data.table + depends = r-dplyr + depends = r-e1071 + depends = r-foreach + depends = r-genomicranges + depends = r-iranges + depends = r-magrittr + depends = r-matrixstats + depends = r-methylkit + depends = r-nnls + depends = r-quadprog + depends = r-rsq + depends = r-s4vectors + depends = r-tidyr + optdepends = r-biocstyle + optdepends = r-covr + optdepends = r-devtools + optdepends = r-doparallel + optdepends = r-ggplot2 + optdepends = r-granulator + optdepends = r-knitr + optdepends = r-parallel + optdepends = r-refmanager + optdepends = r-reshape2 + optdepends = r-rmarkdown + optdepends = r-roxygen2 + optdepends = r-sessioninfo + optdepends = r-testthat + source = https://bioconductor.org/packages/release/bioc/src/contrib/deconvR_1.2.0.tar.gz + sha256sums = a3e6d733e1220482252d753a2e819d769fdc0e5fff0f23ffd64c57c52c1d3f24 + +pkgname = r-deconvr diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..68f314d37660 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,58 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=deconvR +_pkgver=1.2.0 +pkgname=r-${_pkgname,,} +pkgver=1.2.0 +pkgrel=1 +pkgdesc='Simulation and Deconvolution of Omic Profiles' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('Artistic2.0') +depends=( + r + r-assertthat + r-biocgenerics + r-data.table + r-dplyr + r-e1071 + r-foreach + r-genomicranges + r-iranges + r-magrittr + r-matrixstats + r-methylkit + r-nnls + r-quadprog + r-rsq + r-s4vectors + r-tidyr +) +optdepends=( + r-biocstyle + r-covr + r-devtools + r-doparallel + r-ggplot2 + r-granulator + r-knitr + r-parallel + r-refmanager + r-reshape2 + r-rmarkdown + r-roxygen2 + r-sessioninfo + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('a3e6d733e1220482252d753a2e819d769fdc0e5fff0f23ffd64c57c52c1d3f24') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |