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authorViktor Drobot2022-01-18 21:48:33 +0300
committerViktor Drobot2022-01-18 21:48:33 +0300
commitde1832a2797ca6ac052213fb88399481fe9d4160 (patch)
tree33b76dd2151730f8111042f07a83cc1af6e4f062
parent3cd03f316a81e2aec53efece8a94af8f92c61e3b (diff)
downloadaur-de1832a2797ca6ac052213fb88399481fe9d4160.tar.gz
Fix PKGBUILD
-rw-r--r--.SRCINFO3
-rw-r--r--PKGBUILD9
2 files changed, 5 insertions, 7 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 06df61743850..a4f44ad7af67 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -16,9 +16,10 @@ pkgbase = r-delayedarray
optdepends = r-genefilter
optdepends = r-summarizedexperiment
optdepends = r-airway
- optdepends = r-pryr
+ optdepends = r-lobstr
optdepends = r-delayedmatrixstats
optdepends = r-knitr
+ optdepends = r-rmarkdown
optdepends = r-biocstyle
optdepends = r-runit
source = https://bioconductor.org/packages/release/bioc/src/contrib/DelayedArray_0.20.0.tar.gz
diff --git a/PKGBUILD b/PKGBUILD
index 175a1def0bd3..5cd6160e2514 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -11,19 +11,16 @@ arch=(i686 x86_64)
url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html"
license=(Artistic-2.0)
depends=('r>=4.0.0' 'r-biocgenerics>=0.37.0' 'r-matrixgenerics>=1.1.3' 'r-s4vectors>=0.27.2' 'r-iranges>=2.17.3')
-optdepends=(r-biocparallel r-hdf5array r-genefilter r-summarizedexperiment r-airway r-pryr r-delayedmatrixstats r-knitr r-biocstyle r-runit)
+optdepends=(r-biocparallel r-hdf5array r-genefilter r-summarizedexperiment r-airway r-lobstr r-delayedmatrixstats r-knitr r-rmarkdown r-biocstyle r-runit)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz")
sha256sums=('f272d2ca627bde399274d93c6fc397dec6fe6a1bf8cc98ffc111ee1a00fca6b2')
build() {
- cd "${srcdir}"
-
- R CMD INSTALL ${_bcname}_${_bcver}.tar.gz -l ${srcdir}
+ R CMD INSTALL ${_bcname}_${_bcver}.tar.gz -l "${srcdir}"
}
package() {
- cd "${srcdir}"
-
install -dm0755 "${pkgdir}/usr/lib/R/library"
+
cp -a --no-preserve=ownership "${_bcname}" "${pkgdir}/usr/lib/R/library"
}