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authorBioArchLinuxBot2022-11-03 19:57:27 +0000
committerBioArchLinuxBot2022-11-03 19:57:27 +0000
commit11e9325c407e90701bab53cc4739e566485e2911 (patch)
tree4b32ba75aa2cf2016c69e9f55426b8b050a779db
parent4f5dbaafbad7e19dff33337f9a4710d88752d568 (diff)
downloadaur-11e9325c407e90701bab53cc4739e566485e2911.tar.gz
[lilac] updated to 1.14.0-1
-rw-r--r--.SRCINFO10
-rw-r--r--PKGBUILD10
2 files changed, 14 insertions, 6 deletions
diff --git a/.SRCINFO b/.SRCINFO
index bac6811f28a0..d98509be0844 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,6 +1,6 @@
pkgbase = r-demixt
pkgdesc = Cell type-specific deconvolution of heterogeneous tumor samples with two or three components using expression data from RNAseq or microarray platforms
- pkgver = 1.12.0
+ pkgver = 1.14.0
pkgrel = 1
url = https://bioconductor.org/packages/DeMixT
arch = x86_64
@@ -15,7 +15,11 @@ pkgbase = r-demixt
depends = r-rmarkdown
depends = r-summarizedexperiment
depends = r-truncdist
- source = https://bioconductor.org/packages/release/bioc/src/contrib/DeMixT_1.12.0.tar.gz
- sha256sums = ce42e26ce92ffd15299325b9b72ef14d368544110b05310aa20540ab9bd1a687
+ depends = r-dss
+ depends = r-dendextend
+ depends = r-psych
+ depends = r-sva
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/DeMixT_1.14.0.tar.gz
+ sha256sums = 8c8820539068ca225ce7cc39a4e3be82c41f5a8741d6816997643b23679f130a
pkgname = r-demixt
diff --git a/PKGBUILD b/PKGBUILD
index 9b91ad7aac70..1eaaf9585c52 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,9 +1,9 @@
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=DeMixT
-_pkgver=1.12.0
+_pkgver=1.14.0
pkgname=r-${_pkgname,,}
-pkgver=1.12.0
+pkgver=1.14.0
pkgrel=1
pkgdesc='Cell type-specific deconvolution of heterogeneous tumor samples with two or three components using expression data from RNAseq or microarray platforms'
arch=('x86_64')
@@ -20,9 +20,13 @@ depends=(
r-rmarkdown
r-summarizedexperiment
r-truncdist
+ r-dss
+ r-dendextend
+ r-psych
+ r-sva
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('ce42e26ce92ffd15299325b9b72ef14d368544110b05310aa20540ab9bd1a687')
+sha256sums=('8c8820539068ca225ce7cc39a4e3be82c41f5a8741d6816997643b23679f130a')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"