add r-descan2

2 files changed, 92 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..b3ea3291236d
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,38 @@
+pkgbase = r-descan2
+	pkgdesc = Differential Enrichment Scan 2
+	pkgver = 1.16.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/DEScan2
+	arch = x86_64
+	license = Artistic2.0
+	depends = r
+	depends = r-biocgenerics
+	depends = r-biocparallel
+	depends = r-chippeakanno
+	depends = r-data.table
+	depends = r-delayedarray
+	depends = r-genomeinfodb
+	depends = r-genomicalignments
+	depends = r-genomicranges
+	depends = r-glue
+	depends = r-iranges
+	depends = r-plyr
+	depends = r-rcpp
+	depends = r-rcpparmadillo
+	depends = r-rtracklayer
+	depends = r-s4vectors
+	depends = r-summarizedexperiment
+	optdepends = r-biocstyle
+	optdepends = r-edaseq
+	optdepends = r-edger
+	optdepends = r-knitr
+	optdepends = r-limma
+	optdepends = r-rcolorbrewer
+	optdepends = r-rmarkdown
+	optdepends = r-ruvseq
+	optdepends = r-statmod
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/DEScan2_1.16.0.tar.gz
+	sha256sums = 565387866360c0eab0b06e20327ddeae684ab475d20efb7d39d6e18bee4e1243
+
+pkgname = r-descan2
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..3d9166922e86
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,54 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=DEScan2
+_pkgver=1.16.0
+pkgname=r-${_pkgname,,}
+pkgver=1.16.0
+pkgrel=1
+pkgdesc='Differential Enrichment Scan 2'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+  r
+  r-biocgenerics
+  r-biocparallel
+  r-chippeakanno
+  r-data.table
+  r-delayedarray
+  r-genomeinfodb
+  r-genomicalignments
+  r-genomicranges
+  r-glue
+  r-iranges
+  r-plyr
+  r-rcpp
+  r-rcpparmadillo
+  r-rtracklayer
+  r-s4vectors
+  r-summarizedexperiment
+)
+optdepends=(
+  r-biocstyle
+  r-edaseq
+  r-edger
+  r-knitr
+  r-limma
+  r-rcolorbrewer
+  r-rmarkdown
+  r-ruvseq
+  r-statmod
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('565387866360c0eab0b06e20327ddeae684ab475d20efb7d39d6e18bee4e1243')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: