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authorBioArchLinuxBot2023-04-29 06:37:32 +0000
committerBioArchLinuxBot2023-04-29 06:37:32 +0000
commitb38654abf102c3f605cb83a66c9ae50b8eec7453 (patch)
tree08de55dcd72c2a6d5126507f7d2fd8b20958532f
parent75401752516197d88f5bcf892c4c8653e1ef9537 (diff)
downloadaur-b38654abf102c3f605cb83a66c9ae50b8eec7453.tar.gz
[lilac] updated to 1.46.0-1
-rw-r--r--.SRCINFO9
-rw-r--r--PKGBUILD9
2 files changed, 12 insertions, 6 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 8358be01729a..3aa09bdd652e 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,6 +1,6 @@
pkgbase = r-dexseq
pkgdesc = Inference of differential exon usage in RNA-Seq
- pkgver = 1.44.0
+ pkgver = 1.46.0
pkgrel = 1
url = https://bioconductor.org/packages/DEXSeq
arch = any
@@ -24,13 +24,16 @@ pkgbase = r-dexseq
depends = r-stringr
depends = r-summarizedexperiment
optdepends = r-biocstyle
+ optdepends = r-genomicalignments
optdepends = r-genomicfeatures
optdepends = r-knitr
optdepends = r-parathyroidse
optdepends = r-pasilla
+ optdepends = r-pasillabamsubset
optdepends = r-rmarkdown
+ optdepends = r-roxygen2
optdepends = r-testthat
- source = https://bioconductor.org/packages/release/bioc/src/contrib/DEXSeq_1.44.0.tar.gz
- sha256sums = fa2e17a2afa09c4b5d919691a5267b3817add30df3940d2c81aeb0f01444e204
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/DEXSeq_1.46.0.tar.gz
+ sha256sums = 0fa8d00ddbea9a616fd9cf4cd4ea3ce52c43e5e9531133f38503c7af341d917c
pkgname = r-dexseq
diff --git a/PKGBUILD b/PKGBUILD
index 507e23e19c93..27541ccfbecb 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,9 +1,9 @@
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=DEXSeq
-_pkgver=1.44.0
+_pkgver=1.46.0
pkgname=r-${_pkgname,,}
-pkgver=1.44.0
+pkgver=1.46.0
pkgrel=1
pkgdesc='Inference of differential exon usage in RNA-Seq'
arch=('any')
@@ -31,15 +31,18 @@ depends=(
)
optdepends=(
r-biocstyle
+ r-genomicalignments
r-genomicfeatures
r-knitr
r-parathyroidse
r-pasilla
+ r-pasillabamsubset
r-rmarkdown
+ r-roxygen2
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('fa2e17a2afa09c4b5d919691a5267b3817add30df3940d2c81aeb0f01444e204')
+sha256sums=('0fa8d00ddbea9a616fd9cf4cd4ea3ce52c43e5e9531133f38503c7af341d917c')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"