summarylogtreecommitdiffstats
diff options
context:
space:
mode:
authorBioArchLinuxBot2023-10-27 08:28:02 +0000
committerBioArchLinuxBot2023-10-27 08:28:02 +0000
commitf5f3816148f6f517e849f09d40df466d262a6908 (patch)
treee5c3060fdc415eb8892586974be4d3bacfdb9046
parentb38654abf102c3f605cb83a66c9ae50b8eec7453 (diff)
downloadaur-f5f3816148f6f517e849f09d40df466d262a6908.tar.gz
[lilac] updated to 1.48.0-1
-rw-r--r--.SRCINFO7
-rw-r--r--PKGBUILD7
2 files changed, 8 insertions, 6 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 3aa09bdd652e..b946a3195514 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,6 +1,6 @@
pkgbase = r-dexseq
pkgdesc = Inference of differential exon usage in RNA-Seq
- pkgver = 1.46.0
+ pkgver = 1.48.0
pkgrel = 1
url = https://bioconductor.org/packages/DEXSeq
arch = any
@@ -26,6 +26,7 @@ pkgbase = r-dexseq
optdepends = r-biocstyle
optdepends = r-genomicalignments
optdepends = r-genomicfeatures
+ optdepends = r-glmgampoi
optdepends = r-knitr
optdepends = r-parathyroidse
optdepends = r-pasilla
@@ -33,7 +34,7 @@ pkgbase = r-dexseq
optdepends = r-rmarkdown
optdepends = r-roxygen2
optdepends = r-testthat
- source = https://bioconductor.org/packages/release/bioc/src/contrib/DEXSeq_1.46.0.tar.gz
- sha256sums = 0fa8d00ddbea9a616fd9cf4cd4ea3ce52c43e5e9531133f38503c7af341d917c
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/DEXSeq_1.48.0.tar.gz
+ sha256sums = 1c392234ef453a180d523f0d4969fc5dea518422e5c7940a9e16b816d553a9e0
pkgname = r-dexseq
diff --git a/PKGBUILD b/PKGBUILD
index 27541ccfbecb..091be820e70c 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,9 +1,9 @@
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=DEXSeq
-_pkgver=1.46.0
+_pkgver=1.48.0
pkgname=r-${_pkgname,,}
-pkgver=1.46.0
+pkgver=1.48.0
pkgrel=1
pkgdesc='Inference of differential exon usage in RNA-Seq'
arch=('any')
@@ -33,6 +33,7 @@ optdepends=(
r-biocstyle
r-genomicalignments
r-genomicfeatures
+ r-glmgampoi
r-knitr
r-parathyroidse
r-pasilla
@@ -42,7 +43,7 @@ optdepends=(
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('0fa8d00ddbea9a616fd9cf4cd4ea3ce52c43e5e9531133f38503c7af341d917c')
+sha256sums=('1c392234ef453a180d523f0d4969fc5dea518422e5c7940a9e16b816d553a9e0')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"