Version 1.0.6

2 files changed, 111 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..0739517f8e48
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,44 @@
+pkgbase = r-dgeobj.utils
+	pkgdesc = Differential Gene Expression (DGE) Analysis Utility Toolkit
+	pkgver = 1.0.6
+	pkgrel = 1
+	url = https://cran.r-project.org/package=DGEobj.utils
+	arch = any
+	license = GPL3
+	checkdepends = r-biomart
+	checkdepends = r-canvasxpress
+	checkdepends = r-edger
+	checkdepends = r-ggplot2
+	checkdepends = r-ihw
+	checkdepends = r-limma
+	checkdepends = r-qvalue
+	checkdepends = r-rnaseqpower
+	checkdepends = r-statmod
+	checkdepends = r-sva
+	checkdepends = r-testthat
+	checkdepends = r-zfpkm
+	depends = r-assertthat
+	depends = r-dgeobj
+	depends = r-dplyr
+	depends = r-stringr
+	optdepends = r-biomart
+	optdepends = r-canvasxpress
+	optdepends = r-conflicted
+	optdepends = r-edger
+	optdepends = r-ggplot2
+	optdepends = r-glue
+	optdepends = r-ihw
+	optdepends = r-knitr
+	optdepends = r-limma
+	optdepends = r-qvalue
+	optdepends = r-rmarkdown
+	optdepends = r-rnaseqpower
+	optdepends = r-statmod
+	optdepends = r-sva
+	optdepends = r-testthat
+	optdepends = r-zfpkm
+	source = https://cran.r-project.org/src/contrib/DGEobj.utils_1.0.6.tar.gz
+	md5sums = 8acaeb2945ce80bd2f83f88ef365c88f
+	sha256sums = 734c961fcb346643707e693825b4d6d5f1ee4fea4c9bb952d5d1ab2dccf7eb06
+
+pkgname = r-dgeobj.utils
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..c47de3ec74ae
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,67 @@
+# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
+
+_pkgname=DGEobj.utils
+_pkgver=1.0.6
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//-/.}
+pkgrel=1
+pkgdesc="Differential Gene Expression (DGE) Analysis Utility Toolkit"
+arch=(any)
+url="https://cran.r-project.org/package=${_pkgname}"
+license=(GPL3)
+depends=(
+  r-assertthat
+  r-dgeobj
+  r-dplyr
+  r-stringr
+)
+checkdepends=(
+  r-biomart
+  r-canvasxpress
+  r-edger
+  r-ggplot2
+  r-ihw
+  r-limma
+  r-qvalue
+  r-rnaseqpower
+  r-statmod
+  r-sva
+  r-testthat
+  r-zfpkm
+)
+optdepends=(
+  r-biomart
+  r-canvasxpress
+  r-conflicted
+  r-edger
+  r-ggplot2
+  r-glue
+  r-ihw
+  r-knitr
+  r-limma
+  r-qvalue
+  r-rmarkdown
+  r-rnaseqpower
+  r-statmod
+  r-sva
+  r-testthat
+  r-zfpkm
+)
+source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+md5sums=('8acaeb2945ce80bd2f83f88ef365c88f')
+sha256sums=('734c961fcb346643707e693825b4d6d5f1ee4fea4c9bb952d5d1ab2dccf7eb06')
+
+build() {
+  mkdir -p build
+  R CMD INSTALL "$_pkgname" -l build
+}
+
+check() {
+  cd "$_pkgname/tests"
+  R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R
+}
+
+package() {
+  install -d "$pkgdir/usr/lib/R/library"
+  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
+}