[lilac] updated to 4.0.16-2

2 files changed, 20 insertions, 23 deletions

diff --git a/.SRCINFO b/.SRCINFO
index 2de7c03179a2..7ab5b25a5c3f 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,28 +1,27 @@
 pkgbase = r-edger
 	pkgdesc = Empirical Analysis of Digital Gene Expression Data in R
 	pkgver = 4.0.16
-	pkgrel = 1
+	pkgrel = 2
 	url = https://bioconductor.org/packages/edgeR
 	arch = x86_64
-	license = GPL
-	depends = r
+	license = GPL-2.0-or-later
+	depends = blas
+	depends = lapack
 	depends = r-limma
 	depends = r-locfit
 	depends = r-rcpp
-	depends = gcc
 	optdepends = r-annotationdbi
 	optdepends = r-biobase
 	optdepends = r-biocstyle
 	optdepends = r-jsonlite
 	optdepends = r-knitr
-	optdepends = r-matrix
 	optdepends = r-org.hs.eg.db
 	optdepends = r-readr
 	optdepends = r-rhdf5
 	optdepends = r-seuratobject
-	optdepends = r-splines
 	optdepends = r-summarizedexperiment
 	source = https://bioconductor.org/packages/release/bioc/src/contrib/edgeR_4.0.16.tar.gz
-	sha256sums = d145e4f8423632dbea1cf1c2e53ae72ea05a937924090f3c4aff6bcd035cd449
+	md5sums = 8fb1c6c67e29d299c991d16d0f6c5f5b
+	b2sums = 535ad59062196733724e9bbeca903a99f4de3201b807baa851b4a68c58240ec340439ea305e43e22951cd40d907453e7c7c4e08a27d69bd02d3444e9a0aae637
 
 pkgname = r-edger
diff --git a/PKGBUILD b/PKGBUILD
index 5b6b077eab3e..2901ea7ef7a8 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,21 +1,20 @@
-# system requirements: C++11
 # Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
 
 _pkgname=edgeR
 _pkgver=4.0.16
 pkgname=r-${_pkgname,,}
-pkgver=4.0.16
-pkgrel=1
-pkgdesc='Empirical Analysis of Digital Gene Expression Data in R'
-arch=('x86_64')
-url="https://bioconductor.org/packages/${_pkgname}"
-license=('GPL')
+pkgver=${_pkgver//-/.}
+pkgrel=2
+pkgdesc="Empirical Analysis of Digital Gene Expression Data in R"
+arch=(x86_64)
+url="https://bioconductor.org/packages/$_pkgname"
+license=('GPL-2.0-or-later')
 depends=(
-  r
+  blas
+  lapack
   r-limma
   r-locfit
   r-rcpp
-  gcc
 )
 optdepends=(
   r-annotationdbi
@@ -23,23 +22,22 @@ optdepends=(
   r-biocstyle
   r-jsonlite
   r-knitr
-  r-matrix
   r-org.hs.eg.db
   r-readr
   r-rhdf5
   r-seuratobject
-  r-splines
   r-summarizedexperiment
 )
 source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('d145e4f8423632dbea1cf1c2e53ae72ea05a937924090f3c4aff6bcd035cd449')
+md5sums=('8fb1c6c67e29d299c991d16d0f6c5f5b')
+b2sums=('535ad59062196733724e9bbeca903a99f4de3201b807baa851b4a68c58240ec340439ea305e43e22951cd40d907453e7c7c4e08a27d69bd02d3444e9a0aae637')
 
 build() {
-  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+  mkdir build
+  R CMD INSTALL -l build "$_pkgname"
 }
 
 package() {
-  install -dm0755 "${pkgdir}/usr/lib/R/library"
-  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+  install -d "$pkgdir/usr/lib/R/library"
+  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
 }
-# vim:set ts=2 sw=2 et: