add r-epihet

2 files changed, 78 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..d25fd0ea2cfa
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,31 @@
+pkgbase = r-epihet
+	pkgdesc = Determining Epigenetic Heterogeneity from Bisulfite Sequencing Data
+	pkgver = 1.12.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/epihet
+	arch = any
+	license = Artistic2.0
+	depends = r
+	depends = r-data.table
+	depends = r-doparallel
+	depends = r-entropyexplorer
+	depends = r-foreach
+	depends = r-genomicranges
+	depends = r-ggplot2
+	depends = r-igraph
+	depends = r-iranges
+	depends = r-pheatmap
+	depends = r-qvalue
+	depends = r-reactomepa
+	depends = r-rtsne
+	depends = r-s4vectors
+	depends = r-wgcna
+	optdepends = r-clusterprofiler
+	optdepends = r-ggfortify
+	optdepends = r-knitr
+	optdepends = r-org.hs.eg.db
+	optdepends = r-rmarkdown
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/epihet_1.12.0.tar.gz
+	sha256sums = 53a289dbc9ec9b4440abd7d389b86da5e26fb7dbeceb08c6d2e292651214006c
+
+pkgname = r-epihet
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..2295929a2913
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,47 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=epihet
+_pkgver=1.12.0
+pkgname=r-${_pkgname,,}
+pkgver=1.12.0
+pkgrel=1
+pkgdesc='Determining Epigenetic Heterogeneity from Bisulfite Sequencing Data'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+  r
+  r-data.table
+  r-doparallel
+  r-entropyexplorer
+  r-foreach
+  r-genomicranges
+  r-ggplot2
+  r-igraph
+  r-iranges
+  r-pheatmap
+  r-qvalue
+  r-reactomepa
+  r-rtsne
+  r-s4vectors
+  r-wgcna
+)
+optdepends=(
+  r-clusterprofiler
+  r-ggfortify
+  r-knitr
+  r-org.hs.eg.db
+  r-rmarkdown
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('53a289dbc9ec9b4440abd7d389b86da5e26fb7dbeceb08c6d2e292651214006c')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: