add r-fastseg

2 files changed, 54 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..c51aace3bd6b
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,19 @@
+pkgbase = r-fastseg
+	pkgdesc = fastseg - a fast segmentation algorithm
+	pkgver = 1.42.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/fastseg
+	arch = x86_64
+	license = LGPL
+	depends = r
+	depends = r-biobase
+	depends = r-biocgenerics
+	depends = r-genomicranges
+	depends = r-iranges
+	depends = r-s4vectors
+	optdepends = r-dnacopy
+	optdepends = r-oligo
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/fastseg_1.42.0.tar.gz
+	sha256sums = 1e2644aa7bcabe41e91a6e9db44cbc52d425693d7486e3ee0f3fdcb7645821b3
+
+pkgname = r-fastseg
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..9a6686826f56
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,35 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=fastseg
+_pkgver=1.42.0
+pkgname=r-${_pkgname,,}
+pkgver=1.42.0
+pkgrel=1
+pkgdesc='fastseg - a fast segmentation algorithm'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('LGPL')
+depends=(
+  r
+  r-biobase
+  r-biocgenerics
+  r-genomicranges
+  r-iranges
+  r-s4vectors
+)
+optdepends=(
+  r-dnacopy
+  r-oligo
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('1e2644aa7bcabe41e91a6e9db44cbc52d425693d7486e3ee0f3fdcb7645821b3')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: