add r-fcoex

2 files changed, 92 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..ecb63768cdfd
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,38 @@
+pkgbase = r-fcoex
+	pkgdesc = FCBF-based Co-Expression Networks for Single Cells
+	pkgver = 1.10.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/fcoex
+	arch = any
+	license = GPL
+	depends = r
+	depends = r-clusterprofiler
+	depends = r-data.table
+	depends = r-dplyr
+	depends = r-fcbf
+	depends = r-ggplot2
+	depends = r-ggrepel
+	depends = r-igraph
+	depends = r-intergraph
+	depends = r-network
+	depends = r-pathwaypca
+	depends = r-progress
+	depends = r-scales
+	depends = r-singlecellexperiment
+	depends = r-sna
+	depends = r-stringr
+	optdepends = r-biocmanager
+	optdepends = r-devtools
+	optdepends = r-gridextra
+	optdepends = r-knitr
+	optdepends = r-rmarkdown
+	optdepends = r-scater
+	optdepends = r-schex
+	optdepends = r-scran
+	optdepends = r-seurat
+	optdepends = r-tenxpbmcdata
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/fcoex_1.10.0.tar.gz
+	sha256sums = d518f6489d0a07079dea68e94a96c2e66355f0aee736fb97bb8417168eeb7d66
+
+pkgname = r-fcoex
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..33e74a9588ee
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,54 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=fcoex
+_pkgver=1.10.0
+pkgname=r-${_pkgname,,}
+pkgver=1.10.0
+pkgrel=1
+pkgdesc='FCBF-based Co-Expression Networks for Single Cells'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-clusterprofiler
+  r-data.table
+  r-dplyr
+  r-fcbf
+  r-ggplot2
+  r-ggrepel
+  r-igraph
+  r-intergraph
+  r-network
+  r-pathwaypca
+  r-progress
+  r-scales
+  r-singlecellexperiment
+  r-sna
+  r-stringr
+)
+optdepends=(
+  r-biocmanager
+  r-devtools
+  r-gridextra
+  r-knitr
+  r-rmarkdown
+  r-scater
+  r-schex
+  r-scran
+  r-seurat
+  r-tenxpbmcdata
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('d518f6489d0a07079dea68e94a96c2e66355f0aee736fb97bb8417168eeb7d66')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: