Version 1.0.0

2 files changed, 65 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..57e9276eb563
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,21 @@
+pkgbase = r-featseekr
+	pkgdesc = FeatSeekR an R package for unsupervised feature selection
+	pkgver = 1.0.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/FeatSeekR
+	arch = any
+	license = GPL3
+	checkdepends = r-testthat
+	depends = r-pheatmap
+	depends = r-pracma
+	depends = r-summarizedexperiment
+	optdepends = r-biocstyle
+	optdepends = r-dmelsgi
+	optdepends = r-knitr
+	optdepends = r-rmarkdown
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/FeatSeekR_1.0.0.tar.gz
+	md5sums = 14bd43f9ea1a98d7c049f34d20c1a66d
+	sha256sums = ecc4a4f1d63fd757af6db5cef71ddfd3ce28a78da4bff1f0d94da8874eede449
+
+pkgname = r-featseekr
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..88bbbbddb6c1
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,44 @@
+# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
+
+_pkgname=FeatSeekR
+_pkgver=1.0.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//-/.}
+pkgrel=1
+pkgdesc="FeatSeekR an R package for unsupervised feature selection"
+arch=(any)
+url="https://bioconductor.org/packages/${_pkgname}"
+license=(GPL3)
+depends=(
+  r-pheatmap
+  r-pracma
+  r-summarizedexperiment
+)
+checkdepends=(
+  r-testthat
+)
+optdepends=(
+  r-biocstyle
+  r-dmelsgi
+  r-knitr
+  r-rmarkdown
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+md5sums=('14bd43f9ea1a98d7c049f34d20c1a66d')
+sha256sums=('ecc4a4f1d63fd757af6db5cef71ddfd3ce28a78da4bff1f0d94da8874eede449')
+
+build() {
+  mkdir -p build
+  R CMD INSTALL "$_pkgname" -l build
+}
+
+check() {
+  cd "$_pkgname/tests"
+  R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R
+}
+
+package() {
+  install -d "$pkgdir/usr/lib/R/library"
+  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
+}