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authorBioArchLinuxBot2022-11-07 06:04:01 +0000
committerBioArchLinuxBot2022-11-07 06:04:01 +0000
commit7b30a7c2eade1ccfd0a32ad08107e91cc9231b8a (patch)
tree8caabebd31dad02922c34d536672c7f82e7a7ce1
parent5800e6b9e6543372e87321a774e21537fca5def2 (diff)
downloadaur-7b30a7c2eade1ccfd0a32ad08107e91cc9231b8a.tar.gz
[lilac] updated to 1.24.0-1
-rw-r--r--.SRCINFO12
-rw-r--r--PKGBUILD12
2 files changed, 14 insertions, 10 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 34774bdb3546..d8c3e28e814d 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,29 +1,31 @@
pkgbase = r-fgsea
pkgdesc = Fast Gene Set Enrichment Analysis
- pkgver = 1.22.0
+ pkgver = 1.24.0
pkgrel = 1
url = https://bioconductor.org/packages/fgsea
arch = x86_64
license = MIT
+ depends = gcc
depends = r
depends = r-bh
depends = r-biocparallel
+ depends = r-cowplot
depends = r-data.table
depends = r-fastmatch
depends = r-ggplot2
- depends = r-gridextra
depends = r-rcpp
- depends = gcc
+ optdepends = r-aggregation
optdepends = r-annotationdbi
optdepends = r-geoquery
optdepends = r-knitr
optdepends = r-limma
+ optdepends = r-msigdbr
optdepends = r-org.mm.eg.db
optdepends = r-parallel
optdepends = r-reactome.db
optdepends = r-rmarkdown
optdepends = r-testthat
- source = https://bioconductor.org/packages/release/bioc/src/contrib/fgsea_1.22.0.tar.gz
- sha256sums = ef56433dfff96c1ab20737d6af954c1c6f5158fb74654ce875849aa8def3d646
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/fgsea_1.24.0.tar.gz
+ sha256sums = 138f343ead7b33c41044b4235f9b137ba35830c6e670da7af7f8e505592d34bb
pkgname = r-fgsea
diff --git a/PKGBUILD b/PKGBUILD
index 740c70302a9e..1aef7276a0ae 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -2,30 +2,32 @@
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=fgsea
-_pkgver=1.22.0
+_pkgver=1.24.0
pkgname=r-${_pkgname,,}
-pkgver=1.22.0
+pkgver=1.24.0
pkgrel=1
pkgdesc='Fast Gene Set Enrichment Analysis'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
+ gcc
r
r-bh
r-biocparallel
+ r-cowplot
r-data.table
r-fastmatch
r-ggplot2
- r-gridextra
r-rcpp
- gcc
)
optdepends=(
+ r-aggregation
r-annotationdbi
r-geoquery
r-knitr
r-limma
+ r-msigdbr
r-org.mm.eg.db
r-parallel
r-reactome.db
@@ -33,7 +35,7 @@ optdepends=(
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('ef56433dfff96c1ab20737d6af954c1c6f5158fb74654ce875849aa8def3d646')
+sha256sums=('138f343ead7b33c41044b4235f9b137ba35830c6e670da7af7f8e505592d34bb')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"