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| author | Sukanka | 2022-06-06 10:12:47 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 10:12:47 +0800 |
| commit | 48f411a476e054dd78e903e7e53104eb42d7e0c3 (patch) | |
| tree | f2f75513d3c0cf0b3c534deef92129711f59a95f | |
| download | aur-48f411a476e054dd78e903e7e53104eb42d7e0c3.tar.gz | |
add r-funtoonorm
| -rw-r--r-- | .SRCINFO | 22 | ||||
| -rw-r--r-- | PKGBUILD | 38 |
2 files changed, 60 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..9aeacaf91545 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,22 @@ +pkgbase = r-funtoonorm + pkgdesc = Normalization Procedure for Infinium HumanMethylation450 BeadChip Kit + pkgver = 1.20.0 + pkgrel = 1 + url = https://bioconductor.org/packages/funtooNorm + arch = any + license = GPL + depends = r + depends = r-genomeinfodb + depends = r-illuminahumanmethylation450kanno.ilmn12.hg19 + depends = r-illuminahumanmethylation450kmanifest + depends = r-matrixstats + depends = r-minfi + depends = r-pls + optdepends = r-knitr + optdepends = r-minfidata + optdepends = r-prettydoc + optdepends = r-rmarkdown + source = https://bioconductor.org/packages/release/bioc/src/contrib/funtooNorm_1.20.0.tar.gz + sha256sums = ffbb3bfb4e97eddf05693a97c46d82c320910f85a8c0ba3c501cbe658594930b + +pkgname = r-funtoonorm diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..a9d46a1ed848 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,38 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=funtooNorm +_pkgver=1.20.0 +pkgname=r-${_pkgname,,} +pkgver=1.20.0 +pkgrel=1 +pkgdesc='Normalization Procedure for Infinium HumanMethylation450 BeadChip Kit' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-genomeinfodb + r-illuminahumanmethylation450kanno.ilmn12.hg19 + r-illuminahumanmethylation450kmanifest + r-matrixstats + r-minfi + r-pls +) +optdepends=( + r-knitr + r-minfidata + r-prettydoc + r-rmarkdown +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('ffbb3bfb4e97eddf05693a97c46d82c320910f85a8c0ba3c501cbe658594930b') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |