add r-gatefinder

2 files changed, 54 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..795cd28c8859
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,19 @@
+pkgbase = r-gatefinder
+	pkgdesc = Projection-based Gating Strategy Optimization for Flow and Mass Cytometry
+	pkgver = 1.16.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/GateFinder
+	arch = any
+	license = Artistic2.0
+	depends = r
+	depends = r-diptest
+	depends = r-flowcore
+	depends = r-flowfp
+	depends = r-mvoutlier
+	depends = r-splancs
+	optdepends = r-biocgenerics
+	optdepends = r-runit
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/GateFinder_1.16.0.tar.gz
+	sha256sums = 607c0965bba567754cdc71b79c67cdfa7eae7e0464365318c2d2911c6e1e3df3
+
+pkgname = r-gatefinder
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..1efeb1ddd750
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,35 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=GateFinder
+_pkgver=1.16.0
+pkgname=r-${_pkgname,,}
+pkgver=1.16.0
+pkgrel=1
+pkgdesc='Projection-based Gating Strategy Optimization for Flow and Mass Cytometry'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+  r
+  r-diptest
+  r-flowcore
+  r-flowfp
+  r-mvoutlier
+  r-splancs
+)
+optdepends=(
+  r-biocgenerics
+  r-runit
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('607c0965bba567754cdc71b79c67cdfa7eae7e0464365318c2d2911c6e1e3df3')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: