Version 1.0.0

2 files changed, 97 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..ba2e9faf77f8
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,37 @@
+pkgbase = r-gdrcore
+	pkgdesc = Processing functions and interface to process and analyze drug dose-response data
+	pkgver = 1.0.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/gDRcore
+	arch = x86_64
+	license = Artistic2.0
+	checkdepends = r-gdrimport
+	checkdepends = r-gdrtestdata
+	checkdepends = r-qs
+	checkdepends = r-testthat
+	depends = r-biocparallel
+	depends = r-bumpymatrix
+	depends = r-checkmate
+	depends = r-data.table
+	depends = r-futile.logger
+	depends = r-gdrutils
+	depends = r-multiassayexperiment
+	depends = r-purrr
+	depends = r-s4vectors
+	depends = r-stringr
+	depends = r-summarizedexperiment
+	optdepends = r-biocstyle
+	optdepends = r-gdrimport
+	optdepends = r-gdrstyle
+	optdepends = r-gdrtestdata
+	optdepends = r-iranges
+	optdepends = r-knitr
+	optdepends = r-pkgbuild
+	optdepends = r-qs
+	optdepends = r-testthat
+	optdepends = r-yaml
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/gDRcore_1.0.0.tar.gz
+	md5sums = 76f729e9fce669107120d0ec73c32bfc
+	sha256sums = 8eb4527eac26056bed31d02e29703623c11f69505c4224674abe7fa8b6bf05a1
+
+pkgname = r-gdrcore
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..03777abec6a3
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,60 @@
+# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
+
+_pkgname=gDRcore
+_pkgver=1.0.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//-/.}
+pkgrel=1
+pkgdesc="Processing functions and interface to process and analyze drug dose-response data"
+arch=(x86_64)
+url="https://bioconductor.org/packages/${_pkgname}"
+license=(Artistic2.0)
+depends=(
+  r-biocparallel
+  r-bumpymatrix
+  r-checkmate
+  r-data.table
+  r-futile.logger
+  r-gdrutils
+  r-multiassayexperiment
+  r-purrr
+  r-s4vectors
+  r-stringr
+  r-summarizedexperiment
+)
+checkdepends=(
+  r-gdrimport
+  r-gdrtestdata
+  r-qs
+  r-testthat
+)
+optdepends=(
+  r-biocstyle
+  r-gdrimport
+  r-gdrstyle
+  r-gdrtestdata
+  r-iranges
+  r-knitr
+  r-pkgbuild
+  r-qs
+  r-testthat
+  r-yaml
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+md5sums=('76f729e9fce669107120d0ec73c32bfc')
+sha256sums=('8eb4527eac26056bed31d02e29703623c11f69505c4224674abe7fa8b6bf05a1')
+
+build() {
+  mkdir -p build
+  R CMD INSTALL "$_pkgname" -l build
+}
+
+check() {
+  cd "$_pkgname/tests"
+  R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R
+}
+
+package() {
+  install -d "$pkgdir/usr/lib/R/library"
+  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
+}