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authorBioArchLinuxBot2024-05-03 12:11:27 +0000
committerBioArchLinuxBot2024-05-03 12:11:27 +0000
commitc8ca20612e13fcfd2983afac82b20dc63d9dfa9d (patch)
treebfee35ed0b0119eb2c2edb6de04f59dd442bbc06
parent860e1b798eedd4cfc03e363db96251aaf0fbc24d (diff)
downloadaur-c8ca20612e13fcfd2983afac82b20dc63d9dfa9d.tar.gz
[lilac] updated to 1.86.0-1
-rw-r--r--.SRCINFO13
-rw-r--r--PKGBUILD18
2 files changed, 10 insertions, 21 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 311e4e4540c1..cf22dba0d41b 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,7 +1,7 @@
pkgbase = r-genefilter
pkgdesc = methods for filtering genes from high-throughput experiments
- pkgver = 1.84.0
- pkgrel = 2
+ pkgver = 1.86.0
+ pkgrel = 1
url = https://bioconductor.org/packages/genefilter
arch = x86_64
license = Artistic-2.0
@@ -17,11 +17,8 @@ pkgbase = r-genefilter
optdepends = r-rcolorbrewer
optdepends = r-roc
optdepends = r-tkwidgets
- source = https://bioconductor.org/packages/release/bioc/src/contrib/genefilter_1.84.0.tar.gz
- source = genefilter-fix-format.patch::https://github.com/Bioconductor/genefilter/pull/13.patch
- md5sums = 15011d1662a58967aeb3e89f1f660e40
- md5sums = f192fbd037f307740c07f4131aecfcfb
- b2sums = fb1c5d61c75424a5feba2edfcd8fee6b4f224097d9353425f9d533bd323a9e8c6a6f48b67252b6570e308966ca0fa55eeef9a992d181adefa6703eeca9983404
- b2sums = 0b0bf3818c026825f3cf007d566a32404553b4363e2671f14c3465ee3168ef71d8939811d93cd4c0d0c3158decaf5e47f63593f36afb793de183ef7713d8c230
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/genefilter_1.86.0.tar.gz
+ md5sums = 0c5047689b3712935e2db374eb3bcc95
+ b2sums = 5d16ef3e9bc14b064e602eb9290a12b541d5243eea071ed83b536fa9236917a14b29c5f8eac464aadc6f8daf51cb26f3009f9c6d8a91cdac6e4591e3b9e7df41
pkgname = r-genefilter
diff --git a/PKGBUILD b/PKGBUILD
index 4f2fe731f289..302ae7cc46c1 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,10 +1,10 @@
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=genefilter
-_pkgver=1.84.0
+_pkgver=1.86.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
-pkgrel=2
+pkgrel=1
pkgdesc="methods for filtering genes from high-throughput experiments"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
@@ -27,17 +27,9 @@ optdepends=(
r-roc
r-tkwidgets
)
-source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz"
- "$_pkgname-fix-format.patch::https://github.com/Bioconductor/genefilter/pull/13.patch")
-md5sums=('15011d1662a58967aeb3e89f1f660e40'
- 'f192fbd037f307740c07f4131aecfcfb')
-b2sums=('fb1c5d61c75424a5feba2edfcd8fee6b4f224097d9353425f9d533bd323a9e8c6a6f48b67252b6570e308966ca0fa55eeef9a992d181adefa6703eeca9983404'
- '0b0bf3818c026825f3cf007d566a32404553b4363e2671f14c3465ee3168ef71d8939811d93cd4c0d0c3158decaf5e47f63593f36afb793de183ef7713d8c230')
-
-prepare() {
- # fix format string errors
- patch -Np1 -d "$_pkgname" < "$_pkgname-fix-format.patch"
-}
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+md5sums=('0c5047689b3712935e2db374eb3bcc95')
+b2sums=('5d16ef3e9bc14b064e602eb9290a12b541d5243eea071ed83b536fa9236917a14b29c5f8eac464aadc6f8daf51cb26f3009f9c6d8a91cdac6e4591e3b9e7df41')
build() {
mkdir build