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| author | Sukanka | 2022-06-06 10:34:40 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 10:34:40 +0800 |
| commit | 87dfb6f006e5f36c173e5ce433b392914daeacb1 (patch) | |
| tree | 8c1d5eff42c6a1e3702102a61c254473a59c4c6d | |
| download | aur-87dfb6f006e5f36c173e5ce433b392914daeacb1.tar.gz | |
add r-genenetworkbuilder
| -rw-r--r-- | .SRCINFO | 29 | ||||
| -rw-r--r-- | PKGBUILD | 45 |
2 files changed, 74 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..bf9c8a3847ad --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,29 @@ +pkgbase = r-genenetworkbuilder + pkgdesc = GeneNetworkBuilder: a bioconductor package for building regulatory network using ChIP-chip/ChIP-seq data and Gene Expression Data + pkgver = 1.38.0 + pkgrel = 1 + url = https://bioconductor.org/packages/GeneNetworkBuilder + arch = x86_64 + license = GPL + depends = r + depends = r-graph + depends = r-htmlwidgets + depends = r-plyr + depends = r-rcpp + depends = r-rgraphviz + depends = r-rjson + depends = r-xml + optdepends = r-biocgenerics + optdepends = r-biocstyle + optdepends = r-knitr + optdepends = r-magick + optdepends = r-rbgl + optdepends = r-rmarkdown + optdepends = r-runit + optdepends = r-shiny + optdepends = r-simpintlists + optdepends = r-stringdb + source = https://bioconductor.org/packages/release/bioc/src/contrib/GeneNetworkBuilder_1.38.0.tar.gz + sha256sums = 28111ab8cab567bb408dc230c16b5e2c9bff8fc20b5c11a2a4e1d43970bae07b + +pkgname = r-genenetworkbuilder diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..c138ead560b2 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,45 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=GeneNetworkBuilder +_pkgver=1.38.0 +pkgname=r-${_pkgname,,} +pkgver=1.38.0 +pkgrel=1 +pkgdesc='GeneNetworkBuilder: a bioconductor package for building regulatory network using ChIP-chip/ChIP-seq data and Gene Expression Data' +arch=('x86_64') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-graph + r-htmlwidgets + r-plyr + r-rcpp + r-rgraphviz + r-rjson + r-xml +) +optdepends=( + r-biocgenerics + r-biocstyle + r-knitr + r-magick + r-rbgl + r-rmarkdown + r-runit + r-shiny + r-simpintlists + r-stringdb +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('28111ab8cab567bb408dc230c16b5e2c9bff8fc20b5c11a2a4e1d43970bae07b') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |