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author | Sukanka | 2022-06-06 10:44:39 +0800 |
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committer | Sukanka | 2022-06-06 10:44:39 +0800 |
commit | 3683f2fd3bd88673b705a97e69f66caf27d5cd3a (patch) | |
tree | 1de017a256d1e77140e9b75f1aa650b580025f32 | |
download | aur-3683f2fd3bd88673b705a97e69f66caf27d5cd3a.tar.gz |
add r-genomicdistributions
-rw-r--r-- | .SRCINFO | 32 | ||||
-rw-r--r-- | PKGBUILD | 49 |
2 files changed, 81 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..e7d7c2e39d4e --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,32 @@ +pkgbase = r-genomicdistributions + pkgdesc = GenomicDistributions: fast analysis of genomic intervals with Bioconductor + pkgver = 1.4.1 + pkgrel = 1 + url = https://bioconductor.org/packages/GenomicDistributions + arch = any + license = BSD + depends = r + depends = r-biostrings + depends = r-data.table + depends = r-dplyr + depends = r-genomeinfodb + depends = r-genomicranges + depends = r-ggplot2 + depends = r-iranges + depends = r-plyr + depends = r-reshape2 + depends = r-broom + optdepends = r-annotationfilter + optdepends = r-biocstyle + optdepends = r-bsgenome + optdepends = r-ensembldb + optdepends = r-extrafont + optdepends = r-genomicfeatures + optdepends = r-knitr + optdepends = r-rmarkdown + optdepends = r-rtracklayer + optdepends = r-testthat + source = https://bioconductor.org/packages/release/bioc/src/contrib/GenomicDistributions_1.4.1.tar.gz + sha256sums = dc3946669e999f8904c1a3fdd34427aef296c6e260657c52abddcc1d157f32ad + +pkgname = r-genomicdistributions diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..0ff65a934b7e --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,49 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=GenomicDistributions +_pkgver=1.4.1 +pkgname=r-${_pkgname,,} +pkgver=1.4.1 +pkgrel=1 +pkgdesc='GenomicDistributions: fast analysis of genomic intervals with Bioconductor' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('BSD') +depends=( + r + r-biostrings + r-data.table + r-dplyr + r-genomeinfodb + r-genomicranges + r-ggplot2 + r-iranges + r-plyr + r-reshape2 + r-broom +) +optdepends=( + r-annotationfilter + r-biocstyle + r-bsgenome + r-ensembldb + r-extrafont + r-genomicfeatures + r-knitr + r-rmarkdown + r-rtracklayer + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('dc3946669e999f8904c1a3fdd34427aef296c6e260657c52abddcc1d157f32ad') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}" +} +# vim:set ts=2 sw=2 et: |