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| author | Viktor Drobot | 2020-04-28 20:45:14 +0300 |
|---|---|---|
| committer | Viktor Drobot | 2020-04-28 20:45:14 +0300 |
| commit | 9ad8efa51fade4bab8fbc6d10eba04d069098070 (patch) | |
| tree | e14f5e91bb878bda93c27d87664b45129870ad87 | |
| parent | 252840404d8b68079e0b4082cc051751f2198aa0 (diff) | |
| download | aur-9ad8efa51fade4bab8fbc6d10eba04d069098070.tar.gz | |
Update 1.39.3
| -rw-r--r-- | .SRCINFO | 12 | ||||
| -rw-r--r-- | PKGBUILD | 6 |
2 files changed, 9 insertions, 9 deletions
@@ -1,6 +1,6 @@ pkgbase = r-genomicranges pkgdesc = Representation and manipulation of genomic intervals - pkgver = 1.38.0 + pkgver = 1.39.3 pkgrel = 1 url = https://bioconductor.org/packages/release/bioc/html/GenomicRanges.html arch = i686 @@ -9,10 +9,10 @@ pkgbase = r-genomicranges makedepends = gcc depends = r>=2.10 depends = r-biocgenerics>=0.25.3 - depends = r-s4vectors>=0.23.19 - depends = r-iranges>=2.19.9 + depends = r-s4vectors>=0.25.14 + depends = r-iranges>=2.21.6 depends = r-genomeinfodb>=1.15.2 - depends = r-xvector>=0.19.8 + depends = r-xvector>=0.27.2 optdepends = r-biobase optdepends = r-annotationdbi optdepends = r-annotate @@ -46,8 +46,8 @@ pkgbase = r-genomicranges optdepends = r-digest optdepends = r-knitr optdepends = r-biocstyle - source = https://bioconductor.org/packages/release/bioc/src/contrib/GenomicRanges_1.38.0.tar.gz - md5sums = 1cee38e912a367f89297097a1cdbfdb2 + source = https://bioconductor.org/packages/release/bioc/src/contrib/GenomicRanges_1.39.3.tar.gz + md5sums = 21b7e05689fa56405e3fd7e1db062e69 pkgname = r-genomicranges @@ -2,7 +2,7 @@ # Contributor: Grey Christoforo <first name at last name dot net> _bcname=GenomicRanges -_bcver=1.38.0 +_bcver=1.39.3 pkgname=r-${_bcname,,} pkgver=${_bcver//[:-]/.} pkgrel=1 @@ -10,11 +10,11 @@ pkgdesc="Representation and manipulation of genomic intervals" arch=(i686 x86_64) url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html" license=(Artistic-2.0) -depends=('r>=2.10' 'r-biocgenerics>=0.25.3' 'r-s4vectors>=0.23.19' 'r-iranges>=2.19.9' 'r-genomeinfodb>=1.15.2' 'r-xvector>=0.19.8') +depends=('r>=2.10' 'r-biocgenerics>=0.25.3' 'r-s4vectors>=0.25.14' 'r-iranges>=2.21.6' 'r-genomeinfodb>=1.15.2' 'r-xvector>=0.27.2') makedepends=(gcc) optdepends=(r-biobase r-annotationdbi r-annotate r-biostrings r-summarizedexperiment r-rsamtools r-genomicalignments r-rtracklayer r-bsgenome r-genomicfeatures r-gviz r-variantannotation r-annotationhub r-deseq2 r-dexseq r-edger r-kegggraph r-rnaseqdata.hnrnpc.bam.chr14 r-pasillabamsubset r-kegg.db r-hgu95av2.db r-hgu95av2probe r-bsgenome.scerevisiae.ucsc.saccer2 r-bsgenome.hsapiens.ucsc.hg19 bsgenome.mmusculus.ucsc.mm10 r-txdb.athaliana.biomart.plantsmart22 txdb.dmelanogaster.ucsc.dm3.ensgene r-txdb.hsapiens.ucsc.hg19.knowngene r-txdb.mmusculus.ucsc.mm10.knowngene r-runit r-digest r-knitr r-biocstyle) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz") -md5sums=('1cee38e912a367f89297097a1cdbfdb2') +md5sums=('21b7e05689fa56405e3fd7e1db062e69') build() { cd "${srcdir}" |