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| author | Sukanka | 2022-06-06 10:51:19 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 10:51:19 +0800 |
| commit | 8a461c7179b406dc192b0b755091a4477a873125 (patch) | |
| tree | 4855333a63b52b3a7639bb6a0e575d98c2afe4e8 | |
| download | aur-8a461c7179b406dc192b0b755091a4477a873125.tar.gz | |
add r-geoexplorer
| -rw-r--r-- | .SRCINFO | 35 | ||||
| -rw-r--r-- | PKGBUILD | 51 |
2 files changed, 86 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..ae8fb07d6f32 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,35 @@ +pkgbase = r-geoexplorer + pkgdesc = GEOexplorer: an R/Bioconductor package for gene expression analysis and visualisation + pkgver = 1.2.0 + pkgrel = 1 + url = https://bioconductor.org/packages/GEOexplorer + arch = any + license = GPL + depends = r + depends = r-biobase + depends = r-dt + depends = r-factoextra + depends = r-geoquery + depends = r-ggplot2 + depends = r-heatmaply + depends = r-htmltools + depends = r-impute + depends = r-limma + depends = r-maptools + depends = r-pheatmap + depends = r-plotly + depends = r-scales + depends = r-shiny + depends = r-shinybs + depends = r-shinybusy + depends = r-shinyheatmaply + depends = r-stringr + depends = r-umap + optdepends = r-knitr + optdepends = r-rmarkdown + optdepends = r-testthat + optdepends = r-usethis + source = https://bioconductor.org/packages/release/bioc/src/contrib/GEOexplorer_1.2.0.tar.gz + sha256sums = af6172c5ee4c544331a123e14cbff43a171c41b8c3c77c8e8a106d7bc0cd9602 + +pkgname = r-geoexplorer diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..4b7e2d42df6a --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,51 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=GEOexplorer +_pkgver=1.2.0 +pkgname=r-${_pkgname,,} +pkgver=1.2.0 +pkgrel=1 +pkgdesc='GEOexplorer: an R/Bioconductor package for gene expression analysis and visualisation' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-biobase + r-dt + r-factoextra + r-geoquery + r-ggplot2 + r-heatmaply + r-htmltools + r-impute + r-limma + r-maptools + r-pheatmap + r-plotly + r-scales + r-shiny + r-shinybs + r-shinybusy + r-shinyheatmaply + r-stringr + r-umap +) +optdepends=( + r-knitr + r-rmarkdown + r-testthat + r-usethis +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('af6172c5ee4c544331a123e14cbff43a171c41b8c3c77c8e8a106d7bc0cd9602') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |