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| author | Sukanka | 2022-06-06 10:52:54 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 10:52:54 +0800 |
| commit | acdb31874db310e9ee85edfa87160728c28dce3b (patch) | |
| tree | f99ee5dc7b531cb8873c2920154c092ed7c46689 | |
| download | aur-acdb31874db310e9ee85edfa87160728c28dce3b.tar.gz | |
add r-geomxtools
| -rw-r--r-- | .SRCINFO | 31 | ||||
| -rw-r--r-- | PKGBUILD | 47 |
2 files changed, 78 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..ecea7966e06f --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,31 @@ +pkgbase = r-geomxtools + pkgdesc = NanoString GeoMx Tools + pkgver = 3.0.1 + pkgrel = 1 + url = https://bioconductor.org/packages/GeomxTools + arch = any + license = MIT + depends = r + depends = r-biobase + depends = r-biocgenerics + depends = r-data.table + depends = r-dplyr + depends = r-envstats + depends = r-lmertest + depends = r-nanostringnctools + depends = r-outliers + depends = r-readxl + depends = r-reshape2 + depends = r-rjson + depends = r-s4vectors + depends = r-seuratobject + depends = r-ggally + optdepends = r-ggiraph + optdepends = r-knitr + optdepends = r-parallel + optdepends = r-rmarkdown + optdepends = r-testthat + source = https://bioconductor.org/packages/release/bioc/src/contrib/GeomxTools_3.0.1.tar.gz + sha256sums = dbf0c7588c97aded7fac8d29bca7339992f234743a9ef6dba424944fa09644ca + +pkgname = r-geomxtools diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..d865b432eb61 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,47 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=GeomxTools +_pkgver=3.0.1 +pkgname=r-${_pkgname,,} +pkgver=3.0.1 +pkgrel=1 +pkgdesc='NanoString GeoMx Tools' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('MIT') +depends=( + r + r-biobase + r-biocgenerics + r-data.table + r-dplyr + r-envstats + r-lmertest + r-nanostringnctools + r-outliers + r-readxl + r-reshape2 + r-rjson + r-s4vectors + r-seuratobject + r-ggally +) +optdepends=( + r-ggiraph + r-knitr + r-parallel + r-rmarkdown + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('dbf0c7588c97aded7fac8d29bca7339992f234743a9ef6dba424944fa09644ca') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |