add r-getdee2

2 files changed, 50 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..0b61c7bba05e
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,17 @@
+pkgbase = r-getdee2
+	pkgdesc = Programmatic access to the DEE2 RNA expression dataset
+	pkgver = 1.6.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/getDEE2
+	arch = any
+	license = GPL
+	depends = r
+	depends = r-htm2txt
+	depends = r-summarizedexperiment
+	optdepends = r-knitr
+	optdepends = r-rmarkdown
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/getDEE2_1.6.0.tar.gz
+	sha256sums = fb7417a3bdcc11559426f61729d19802667aa1f0179f7c3c40efa85c4b8e4a30
+
+pkgname = r-getdee2
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..5bd089ea017a
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,33 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=getDEE2
+_pkgver=1.6.0
+pkgname=r-${_pkgname,,}
+pkgver=1.6.0
+pkgrel=1
+pkgdesc='Programmatic access to the DEE2 RNA expression dataset'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-htm2txt
+  r-summarizedexperiment
+)
+optdepends=(
+  r-knitr
+  r-rmarkdown
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('fb7417a3bdcc11559426f61729d19802667aa1f0179f7c3c40efa85c4b8e4a30')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: