add r-gosemsim

2 files changed, 66 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..f0c766e119e4
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,25 @@
+pkgbase = r-gosemsim
+	pkgdesc = GO-terms Semantic Similarity Measures
+	pkgver = 2.22.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/GOSemSim
+	arch = x86_64
+	license = Artistic2.0
+	depends = r
+	depends = r-annotationdbi
+	depends = r-go.db
+	depends = r-rcpp
+	optdepends = r-annotationhub
+	optdepends = r-biocmanager
+	optdepends = r-clusterprofiler
+	optdepends = r-dose
+	optdepends = r-knitr
+	optdepends = r-org.hs.eg.db
+	optdepends = r-prettydoc
+	optdepends = r-rmarkdown
+	optdepends = r-rocr
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/GOSemSim_2.22.0.tar.gz
+	sha256sums = 6d93c0bd9075bb3fb3b65d08906a657ddb8ee5d3ced337914b0f54d0fe2de1c2
+
+pkgname = r-gosemsim
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..5c9545f4b685
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,41 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=GOSemSim
+_pkgver=2.22.0
+pkgname=r-${_pkgname,,}
+pkgver=2.22.0
+pkgrel=1
+pkgdesc='GO-terms Semantic Similarity Measures'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+  r
+  r-annotationdbi
+  r-go.db
+  r-rcpp
+)
+optdepends=(
+  r-annotationhub
+  r-biocmanager
+  r-clusterprofiler
+  r-dose
+  r-knitr
+  r-org.hs.eg.db
+  r-prettydoc
+  r-rmarkdown
+  r-rocr
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('6d93c0bd9075bb3fb3b65d08906a657ddb8ee5d3ced337914b0f54d0fe2de1c2')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: