add r-gsean

2 files changed, 56 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..644e9414cb07
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,20 @@
+pkgbase = r-gsean
+	pkgdesc = Gene Set Enrichment Analysis with Networks
+	pkgver = 1.16.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/gsean
+	arch = any
+	license = Artistic2.0
+	depends = r
+	depends = r-fgsea
+	depends = r-ppinfer
+	optdepends = r-knitr
+	optdepends = r-plotly
+	optdepends = r-ranks
+	optdepends = r-rmarkdown
+	optdepends = r-summarizedexperiment
+	optdepends = r-wgcna
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/gsean_1.16.0.tar.gz
+	sha256sums = 21944c4453376471c719e4d4fd93f48797d5f0cee4af449da4bcf975aa0de5ee
+
+pkgname = r-gsean
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..96f9c2cf1179
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,36 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=gsean
+_pkgver=1.16.0
+pkgname=r-${_pkgname,,}
+pkgver=1.16.0
+pkgrel=1
+pkgdesc='Gene Set Enrichment Analysis with Networks'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+  r
+  r-fgsea
+  r-ppinfer
+)
+optdepends=(
+  r-knitr
+  r-plotly
+  r-ranks
+  r-rmarkdown
+  r-summarizedexperiment
+  r-wgcna
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('21944c4453376471c719e4d4fd93f48797d5f0cee4af449da4bcf975aa0de5ee')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: