add r-gsgalgor

2 files changed, 77 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..80b6443fb893
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,30 @@
+pkgbase = r-gsgalgor
+	pkgdesc = An Evolutionary Framework for the Identification and Study of Prognostic Gene Expression Signatures in Cancer
+	pkgver = 1.6.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/GSgalgoR
+	arch = any
+	license = MIT
+	depends = r
+	depends = r-doparallel
+	depends = r-foreach
+	depends = r-matchingr
+	depends = r-nsga2r
+	depends = r-proxy
+	optdepends = r-biobase
+	optdepends = r-biocstyle
+	optdepends = r-breastcancertransbig
+	optdepends = r-breastcancerupp
+	optdepends = r-genefu
+	optdepends = r-ggplot2
+	optdepends = r-ic10trainingdata
+	optdepends = r-knitr
+	optdepends = r-pamr
+	optdepends = r-rmarkdown
+	optdepends = r-survcomp
+	optdepends = r-survminer
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/GSgalgoR_1.6.0.tar.gz
+	sha256sums = e336454c7e589aad63af8c4e1ceb8dd9b903f3af6aa06a61ff82319f0be726f2
+
+pkgname = r-gsgalgor
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..c58d4fd2df0f
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,47 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=GSgalgoR
+_pkgver=1.6.0
+pkgname=r-${_pkgname,,}
+pkgver=1.6.0
+pkgrel=1
+pkgdesc='An Evolutionary Framework for the Identification and Study of Prognostic Gene Expression Signatures in Cancer'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('MIT')
+depends=(
+  r
+  r-doparallel
+  r-foreach
+  r-matchingr
+  r-nsga2r
+  r-proxy
+)
+optdepends=(
+  r-biobase
+  r-biocstyle
+  r-breastcancertransbig
+  r-breastcancerupp
+  r-genefu
+  r-ggplot2
+  r-ic10trainingdata
+  r-knitr
+  r-pamr
+  r-rmarkdown
+  r-survcomp
+  r-survminer
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('e336454c7e589aad63af8c4e1ceb8dd9b903f3af6aa06a61ff82319f0be726f2')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+  install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
+}
+# vim:set ts=2 sw=2 et: