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authorSukanka2022-06-06 11:57:48 +0800
committerSukanka2022-06-06 11:57:48 +0800
commitb5c9c18312e33e26ab122b8ddefa3420b62174eb (patch)
treeaa14fd3b7240b8951c2d3aa6b59635d4c5a23bf9
downloadaur-b5c9c18312e33e26ab122b8ddefa3420b62174eb.tar.gz
add r-gunifrac
-rw-r--r--.SRCINFO25
-rw-r--r--PKGBUILD41
2 files changed, 66 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..9caa4b116dc7
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,25 @@
+pkgbase = r-gunifrac
+ pkgdesc = Generalized UniFrac Distances, Distance-Based Multivariate Methods and Feature-Based Univariate Methods for Microbiome Data Analysis
+ pkgver = 1.6
+ pkgrel = 3
+ url = https://cran.r-project.org/package=GUniFrac
+ arch = x86_64
+ license = GPL
+ depends = r
+ depends = r-ape
+ depends = r-dirmult
+ depends = r-foreach
+ depends = r-ggplot2
+ depends = r-ggrepel
+ depends = r-lmertest
+ depends = r-matrixstats
+ depends = r-modeest
+ depends = r-rcpp
+ depends = r-rmutil
+ depends = r-statmod
+ depends = r-vegan
+ optdepends = r-ade4
+ source = https://cran.r-project.org/src/contrib/GUniFrac_1.6.tar.gz
+ sha256sums = 9678f85d3eaf1f5c4714a6d2115305d3adafe666398f19477e4b28cf7fcec54f
+
+pkgname = r-gunifrac
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..a5829c68731b
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,41 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=GUniFrac
+_pkgver=1.6
+pkgname=r-${_pkgname,,}
+pkgver=1.6
+pkgrel=3
+pkgdesc='Generalized UniFrac Distances, Distance-Based Multivariate Methods and Feature-Based Univariate Methods for Microbiome Data Analysis'
+arch=('x86_64')
+url="https://cran.r-project.org/package=${_pkgname}"
+license=('GPL')
+depends=(
+ r
+ r-ape
+ r-dirmult
+ r-foreach
+ r-ggplot2
+ r-ggrepel
+ r-lmertest
+ r-matrixstats
+ r-modeest
+ r-rcpp
+ r-rmutil
+ r-statmod
+ r-vegan
+)
+optdepends=(
+ r-ade4
+)
+source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('9678f85d3eaf1f5c4714a6d2115305d3adafe666398f19477e4b28cf7fcec54f')
+
+build() {
+ R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+ install -dm0755 "${pkgdir}/usr/lib/R/library"
+ cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: