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| author | Sukanka | 2022-06-06 12:01:58 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 12:01:58 +0800 |
| commit | cf0313eb624472e4c4bc51b2beac1ecd31203a8d (patch) | |
| tree | 092ff39a9a1c4cfaeb06e42a1c506e68ee427405 | |
| download | aur-cf0313eb624472e4c4bc51b2beac1ecd31203a8d.tar.gz | |
add r-hapfabia
| -rw-r--r-- | .SRCINFO | 14 | ||||
| -rw-r--r-- | PKGBUILD | 28 |
2 files changed, 42 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..9ec7c27a1b3d --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,14 @@ +pkgbase = r-hapfabia + pkgdesc = hapFabia: Identification of very short segments of identity by descent (IBD) characterized by rare variants in large sequencing data + pkgver = 1.38.0 + pkgrel = 1 + url = https://bioconductor.org/packages/hapFabia + arch = x86_64 + license = LGPL + depends = r + depends = r-biobase + depends = r-fabia + source = https://bioconductor.org/packages/release/bioc/src/contrib/hapFabia_1.38.0.tar.gz + sha256sums = b956945000378fb62366ab358ddad36ec938ee37e37ee5daae0a556f61b8a0d0 + +pkgname = r-hapfabia diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..3ab9cf2fd482 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,28 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=hapFabia +_pkgver=1.38.0 +pkgname=r-${_pkgname,,} +pkgver=1.38.0 +pkgrel=1 +pkgdesc='hapFabia: Identification of very short segments of identity by descent (IBD) characterized by rare variants in large sequencing data' +arch=('x86_64') +url="https://bioconductor.org/packages/${_pkgname}" +license=('LGPL') +depends=( + r + r-biobase + r-fabia +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('b956945000378fb62366ab358ddad36ec938ee37e37ee5daae0a556f61b8a0d0') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |