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author | Sukanka | 2022-06-06 12:50:28 +0800 |
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committer | Sukanka | 2022-06-06 12:50:28 +0800 |
commit | 104a4c96e4b6875d549bc7723e1f8d4c280c52d4 (patch) | |
tree | 5fd8bfd3cbc8a04d4da5795578a65f232169d87d | |
download | aur-104a4c96e4b6875d549bc7723e1f8d4c280c52d4.tar.gz |
add r-imas
-rw-r--r-- | .SRCINFO | 31 | ||||
-rw-r--r-- | PKGBUILD | 47 |
2 files changed, 78 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..15e99cc717b4 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,31 @@ +pkgbase = r-imas + pkgdesc = Integrative analysis of Multi-omics data for Alternative Splicing + pkgver = 1.20.0 + pkgrel = 1 + url = https://bioconductor.org/packages/IMAS + arch = any + license = GPL + depends = r + depends = r-annotationdbi + depends = r-biocgenerics + depends = r-biocparallel + depends = r-doparallel + depends = r-foreach + depends = r-genomeinfodb + depends = r-genomicalignments + depends = r-genomicfeatures + depends = r-genomicranges + depends = r-ggfortify + depends = r-ggplot2 + depends = r-gridextra + depends = r-iranges + depends = r-ivas + depends = r-lme4 + depends = r-rsamtools + depends = r-s4vectors + optdepends = r-biocstyle + optdepends = r-runit + source = https://bioconductor.org/packages/release/bioc/src/contrib/IMAS_1.20.0.tar.gz + sha256sums = df1e7f441a5fedd14d50df1fd699f921154448f283da193f39f872d9c12ceb1d + +pkgname = r-imas diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..cc7f15573a25 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,47 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=IMAS +_pkgver=1.20.0 +pkgname=r-${_pkgname,,} +pkgver=1.20.0 +pkgrel=1 +pkgdesc='Integrative analysis of Multi-omics data for Alternative Splicing' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-annotationdbi + r-biocgenerics + r-biocparallel + r-doparallel + r-foreach + r-genomeinfodb + r-genomicalignments + r-genomicfeatures + r-genomicranges + r-ggfortify + r-ggplot2 + r-gridextra + r-iranges + r-ivas + r-lme4 + r-rsamtools + r-s4vectors +) +optdepends=( + r-biocstyle + r-runit +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('df1e7f441a5fedd14d50df1fd699f921154448f283da193f39f872d9c12ceb1d') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |