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| author | Sukanka | 2022-06-06 13:49:25 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 13:49:25 +0800 |
| commit | 701be8a0cdaa6566736179fe5a95df65c24f53ed (patch) | |
| tree | 754aab0ffb3c7b6e8356f9449b729bde81673c65 | |
| download | aur-701be8a0cdaa6566736179fe5a95df65c24f53ed.tar.gz | |
add r-knowseq
| -rw-r--r-- | .SRCINFO | 33 | ||||
| -rw-r--r-- | PKGBUILD | 49 |
2 files changed, 82 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..c412534dd964 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,33 @@ +pkgbase = r-knowseq + pkgdesc = KnowSeq R/Bioc package: The Smart Transcriptomic Pipeline + pkgver = 1.10.0 + pkgrel = 1 + url = https://bioconductor.org/packages/KnowSeq + arch = any + license = GPL + depends = r + depends = r-caret + depends = r-cqn + depends = r-e1071 + depends = r-edger + depends = r-ggplot2 + depends = r-gridextra + depends = r-hmisc + depends = r-httr + depends = r-jsonlite + depends = r-kernlab + depends = r-limma + depends = r-praznik + depends = r-r.utils + depends = r-randomforest + depends = r-reshape2 + depends = r-rlist + depends = r-rmarkdown + depends = r-stringr + depends = r-sva + depends = r-xml + optdepends = r-knitr + source = https://bioconductor.org/packages/release/bioc/src/contrib/KnowSeq_1.10.0.tar.gz + sha256sums = 237e5551712291e0c896649dd604653d2f2e7353c3fac6886eb25d771e076572 + +pkgname = r-knowseq diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..6bbf0a60e725 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,49 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=KnowSeq +_pkgver=1.10.0 +pkgname=r-${_pkgname,,} +pkgver=1.10.0 +pkgrel=1 +pkgdesc='KnowSeq R/Bioc package: The Smart Transcriptomic Pipeline' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-caret + r-cqn + r-e1071 + r-edger + r-ggplot2 + r-gridextra + r-hmisc + r-httr + r-jsonlite + r-kernlab + r-limma + r-praznik + r-r.utils + r-randomforest + r-reshape2 + r-rlist + r-rmarkdown + r-stringr + r-sva + r-xml +) +optdepends=( + r-knitr +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('237e5551712291e0c896649dd604653d2f2e7353c3fac6886eb25d771e076572') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |